Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4707 |
Symbol | |
ID | 1041940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5351395 |
End bp | 5351745 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637148110 |
Product | transport-associated protein |
Protein accession | NP_746816 |
Protein GI | 26991391 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00217947 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAGT TCGCCATTGC TGCCGCTACT GCTACCGCTC TGACCCTGAC CATGGCTAAC GGTGCATTCG CCGCTGAGCC AACCCAGGCT CCAGTCATGT TGGCGGCCAA CACCGTCGAC AACGCCAAGC AAGAAGGCTC CGACACTTGG ATCACTACCA AGGTCAAAGC TGATCTGCTG ACTGAAAAAG GCATCCCAGG CAGCGACATC AAAGTCGAGA CCAGCCAAGG CGTTGTTTCG CTGTCTTCTG ATGTGAAGGT TACCGAATCG CAGAAAGCAG AAGCGGTGCG CATTACCAAG AACATCAAAG GCGTCAAGAG CGTAATGTCT GACGGCCTGA AAGCCGAATA A
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Protein sequence | MKKFAIAAAT ATALTLTMAN GAFAAEPTQA PVMLAANTVD NAKQEGSDTW ITTKVKADLL TEKGIPGSDI KVETSQGVVS LSSDVKVTES QKAEAVRITK NIKGVKSVMS DGLKAE
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