Gene PP_4707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4707 
Symbol 
ID1041940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5351395 
End bp5351745 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content54% 
IMG OID637148110 
Producttransport-associated protein 
Protein accessionNP_746816 
Protein GI26991391 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217947 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGT TCGCCATTGC TGCCGCTACT GCTACCGCTC TGACCCTGAC CATGGCTAAC 
GGTGCATTCG CCGCTGAGCC AACCCAGGCT CCAGTCATGT TGGCGGCCAA CACCGTCGAC
AACGCCAAGC AAGAAGGCTC CGACACTTGG ATCACTACCA AGGTCAAAGC TGATCTGCTG
ACTGAAAAAG GCATCCCAGG CAGCGACATC AAAGTCGAGA CCAGCCAAGG CGTTGTTTCG
CTGTCTTCTG ATGTGAAGGT TACCGAATCG CAGAAAGCAG AAGCGGTGCG CATTACCAAG
AACATCAAAG GCGTCAAGAG CGTAATGTCT GACGGCCTGA AAGCCGAATA A
 
Protein sequence
MKKFAIAAAT ATALTLTMAN GAFAAEPTQA PVMLAANTVD NAKQEGSDTW ITTKVKADLL 
TEKGIPGSDI KVETSQGVVS LSSDVKVTES QKAEAVRITK NIKGVKSVMS DGLKAE