| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4704 |
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| Symbol | |
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| ID | 1042000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5347525 |
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| End bp | 5350461 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148107 |
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| Product | hypothetical protein |
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| Protein accession | NP_746813 |
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| Protein GI | 26991388 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.542548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00128014 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAAAG GATTGACTCG CGCCGCTGGC GCAATCGTGG CCTTGGTAGC CCTGTATAGC
CTGCTCGGCT TTCTCATTCT TCCCGGTGTC GCACTGCGCA TCGCCAACCA GCAGTTGGCC
CAATACGCCA CCGTGCCGGC CCACCTCGAA CGGATCGAAC TCAACCCCTT CAGCCTCGAG
CTGACGCTGT GGGGCCTGCA GATCGGCGAG CCGGGCAAGG AACAGGTCGG TTTCGAGCGT
CTTTACGCTA ACGCCTCGCT CGACAGCCTG TGGACAAAAG CCCTGCATCT GGAAGCGGTG
GAGCTCGACA AACCGCGCAA CGAAGTGCTG TTCGCCAAGG ACGGTACCCT CAACCTGACC
GGGTTGTTCA AACTACCGGC CAGCGAAGCC AAACCCGAAG AGCCGCCCAG CGACCCGTTC
CCGCTGCGTA TTGGCAGCAT CAAGCTCATC GACGGTTACC TGCACTTCGA GGACCTGCGG
CCCAGCGAGC CGATCGAGTT CCTCTACGAC AACATGAATC TGGAGCTGAA AAACCTCAGC
ACCCTGCCCA ACGACAATGC CGACATGACC TTGGTGGCCA GCGGTCCCAA TGGCGGACGC
ATCGACTGGA AGGGAACCCT GAGCCTGTCG CCGATCGCCT CCGAAGGCAC ACTGAAGGTC
ACTGACGGCA AGATGAAGCT GTTCTGGCCC TACGTGCGCG ATGCCGTGCC ACTGGTGCTG
GAAGACGGCG TGGTAAGCCT CGATACGCAT TACAAGCTCA ACCTCGCCAA ACAGACCGAG
CTGCTGCTGG ATAACGTCTC CGTGCGCATC GCGCCATTCG CCATCAAGGC GCCGGATGGC
CGACCGTTGG CACGTCTGGC CAGCCTGGAG GTTAGCGAAA CCTCCATCGA TCTGGTCAAG
CAGCAGGTCA CCGTGGGCAA GGTTCGCAGC GAAAAGCTCG AAACCTGGGC GGCGCTGGAA
AAAGATGGCC AGCTCGACTG GCAGAAGCTG TTTGCCAGCC AACCCACCAA GGCCACGCCG
AAGGAAAAGG CCGAGCCGGC TGCCGCAGAA CCTACGCCTG AAGAGAAAGC TGCCAAGGAG
CCAAGCAAAC CCTGGCAAGT GCTGCTCAAG GACGTGCAGT TGCGCAACTA CCTGGTGCAT
CTGGCAGATC GCAGCCAGAA GGAACCGGTA GCCTTGGACA TTGGCCCCCT CAACGCCGAC
CTGCAAGGTT TCGACAGCCT CAACCAGTCG CCCTTCACCC TCAAACTCGA TACCGGTGTG
GGCAAGCAAG GCAAGCTGCA GGCCGCAGGC CAGGTCAACC TGGCACCGAT ATGGGCAAAG
CTGGATGTGA GCACCCGCGA CATCGACCTG CGTGTAGCCC AGGCCTACAT CAGCCCGTTC
ATCCTGCTGG AGCTGCGCAG CGGCATGCTC TCGAGCGACC TCAAGGTCGA CCTGAAGAAC
ACCGCGCCGC TGGCCTTCAA TGTGACCGGC AAGGCGCAGG TCAGCCAGTT GCATACCCTC
GACACCATCA AGAGCCGCGA CTTCGTCAAA TGGCAGCAGG TGAACGTCGA CGGCTTGTCC
TACGTGCACG GCGATGCTCT GTCGATCGAC AAAGTGACCC TGCTGCAGCC CTATGCACGC
TTCATCATCA ACGAAGACCG CACCACCAAT GTCAATGACC TGCTGATCCC GCAACCGGCC
GACGCCCCGG CGAGCAGCCA GCCCAAGCCG ACCACGGCCA GCAACAACAA GCCGCTTGGC
ATCCATATCG GGCAGATTGA CATCAACGAC GGCTCGGCCA ACTTTGCCGA CCTGTCGCTT
ACCCCCAACT TCGCCACGGC CATCCAGCAA CTCAACGGCC AGATCGGCAC CATCGACAAC
CGCAAGCCAC AGCCGGCCAA GGTCGACGTC AAGGGCAAGG TAGACCGCTA CGCACCGGTT
ACCATCAAGG GCGCACTCAA CCCGTTCAAC CCACTGGCCA GCCTGGACAT TGCCACCAGC
TTCAAGCGCG TCGAATTGAC CACGCTGACG CCCTACTCCG GCAAGTTCGC CGGCTTCCGC
ATCCGCAAGG GCCGGCTGAA CCTGGACCTG CACTATCTGA TCACCAACGG CCAACTCAAG
GCCGAGAACA AGGTAGTAGT GGAGCAACTG CAGCTGGGCG AGAAAGTCGA CAGCCCGGAT
GCGGTCGACC TGCCGATCCG CCTGGCGGTG GCATTGCTGA AGGATACCGA GGGCAAGATC
TCGATCGAGC TGCCGGTGTC TGGCGACCTC AACAACCCGC AATTCAGCGT GATGCCGATT
GTTTGGCAAA CCCTGCGCAA CCTGGTGCTG CGCGCGGCGC AGGCGCCATT CAAATTCATT
GGCGGGCTGA TCAGCGGCGG TAGCTCGGAA GACCTTGGCA ACGTGGCCTT CGCCCCCGGC
TCCAGCGAAC TCAGCGGCGA GGCCCAGTCG TCCTTGGACA AGCTGGCATC CGCGCTGAAA
GAGCGCCCGG AACTGCGCCT GGAAATCGAA GGCACCAGCG CCCAGGCCAG CGACGGCCCG
CTGATTGCCC AACAGCGCCT TGAGCGTGAG TACCAGGCCA CCTGGTACAA GATCCTGCAG
CGACGGGGTG ACAAGGTGCC GGCCAATGCC TCGATGCTGG TGGTGGACGA CAGCGACAAG
CCCGCGATGC TCGAAGGCAT TTACCGTACC CGCCTGAAAC AGCAGCCGCC TGCCGAATGG
GAGCAGTTGG GCCGTGACGA GCGCGCCGCC AAGCTGCGCG AGGCCGTGAT CAAGTCGTGG
GCCGAGAGTA CCGCCTTGCT GCGTACCTTG GGGCAGGAGC GGGCCAGCAG CATCAAGGAC
TATCTGGTCG ACAAGGGCAA GCTGGAAGAC GACCGGGTGT ACTTCATCGA TACCAGCCTG
GGGCAGCCTC AAAGCGATGG CCGGGTGGTG ACACCGATGC ACCTGGATGC CGAGTAA
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| Protein sequence | MYKGLTRAAG AIVALVALYS LLGFLILPGV ALRIANQQLA QYATVPAHLE RIELNPFSLE
LTLWGLQIGE PGKEQVGFER LYANASLDSL WTKALHLEAV ELDKPRNEVL FAKDGTLNLT
GLFKLPASEA KPEEPPSDPF PLRIGSIKLI DGYLHFEDLR PSEPIEFLYD NMNLELKNLS
TLPNDNADMT LVASGPNGGR IDWKGTLSLS PIASEGTLKV TDGKMKLFWP YVRDAVPLVL
EDGVVSLDTH YKLNLAKQTE LLLDNVSVRI APFAIKAPDG RPLARLASLE VSETSIDLVK
QQVTVGKVRS EKLETWAALE KDGQLDWQKL FASQPTKATP KEKAEPAAAE PTPEEKAAKE
PSKPWQVLLK DVQLRNYLVH LADRSQKEPV ALDIGPLNAD LQGFDSLNQS PFTLKLDTGV
GKQGKLQAAG QVNLAPIWAK LDVSTRDIDL RVAQAYISPF ILLELRSGML SSDLKVDLKN
TAPLAFNVTG KAQVSQLHTL DTIKSRDFVK WQQVNVDGLS YVHGDALSID KVTLLQPYAR
FIINEDRTTN VNDLLIPQPA DAPASSQPKP TTASNNKPLG IHIGQIDIND GSANFADLSL
TPNFATAIQQ LNGQIGTIDN RKPQPAKVDV KGKVDRYAPV TIKGALNPFN PLASLDIATS
FKRVELTTLT PYSGKFAGFR IRKGRLNLDL HYLITNGQLK AENKVVVEQL QLGEKVDSPD
AVDLPIRLAV ALLKDTEGKI SIELPVSGDL NNPQFSVMPI VWQTLRNLVL RAAQAPFKFI
GGLISGGSSE DLGNVAFAPG SSELSGEAQS SLDKLASALK ERPELRLEIE GTSAQASDGP
LIAQQRLERE YQATWYKILQ RRGDKVPANA SMLVVDDSDK PAMLEGIYRT RLKQQPPAEW
EQLGRDERAA KLREAVIKSW AESTALLRTL GQERASSIKD YLVDKGKLED DRVYFIDTSL
GQPQSDGRVV TPMHLDAE
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