Gene PP_4695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4695 
Symbol 
ID1044374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5333569 
End bp5336544 
Gene Length2976 bp 
Protein Length991 aa 
Translation table11 
GC content64% 
IMG OID637148098 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionNP_746804 
Protein GI26991379 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000969954 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCGATGA GCTTTAGCCT GACCCAGATG ATCCTGATCA GCGCCGGGTA CCTCATGGTG 
CTGTTCGGCG TGGCCTGGAT CAGCGAGCGC GGGCTGATCC CGCGTTCGAT CATTCGCCAC
CCACTTACCT ACACCCTGTC GCTGGGCGTC TACGCCAGTG CCTGGGCCTT CTATGGCTCG
GTTGGCCTGG CCTACCAGTA CGGCTACGGC TTCCTTGCCT GTTACCTGGG GGTGTCTGGC
GCATTCCTGC TGGCGCCGGT GCTGCTCTAC CCGATCCTCA AGATCACCCG CACCTATCAG
CTGTCATCGC TGGCCGACCT GCTGGCCTTC CGCTTCCGCA GTACCTGGGC CGGGGCCTTG
ACCACCATCA TCATGCTGAT TGGCGTGCTG CCATTGCTGG CCTTGCAGAT CCAGGCGGTG
GCCGATTCGA TCAGTATCCT TACCGGTGAA CCGGTCAAAG CCCGGGTGGC CTTTGCCTTT
TGCACGCTGA TCATTCTGTT CACCATCTTC TTCGGCTCGC GGCACATCGC CACGCGCGAG
AAGCATGAGG GGTTGGTTTT CGCCATCGCC TTCGAGTCGG TGATCAAGCT GCTGGCCCTG
GGCGGTATCG GCCTGTATGC CTTGTATGGC GTATTCGGTG GCCCGCACGA GCTGGAAGTC
TGGCTGCTGC AGAACCAGAC CGCCCTCGCC GCCCTGCACA CCCCACTGCA GGAAGGCCCA
TGGCGCACCC TGCTGCTGGT GTTCTTCGCC TCGGCCATCG TCATGCCGCA CATGTACCAC
ATGGCCTTTA CCGAGAACCT CAACCCGCGC TCGCTGGTCA GCGCCAGCTG GGGCCTGCCG
CTGTTCCTGC TGCTGATGAG CCTTGCCGTG CCGCTGGTGC TGTGGGCCGG CCTGCGCCTG
GGCGCCAGCA CCAACCCCGA GTACTTCACC CTGGGCCTGG GCATCGCCGC CAACAACCAG
GCATTGGCAC TGCTGGCCTA CATTGGCGGC CTGTCGGCAG CCAGCGGCCT GATCATCGTC
ACCACCCTGG CGCTGTCGGG CATGGCCCTG AACCACCTGG TGCTGCCGCT TTACCAGCCG
CCGGCCGAGG GCAACATCTA CCGTTGGCTG AAGTGGACCC GCCGTGCACT GATCGTCGCC
ATCATCACCG CCGGCTTCAT GTTCTACCTG AGCCAGAACT ACCACCAGAG CCTGGCCAAC
CTGGGCATCG TCGCCTTCGT CGCCACCTTG CAGTTCCTGC CCGGAGTGCT GTCGGTACTC
TACTGGCCAA CCGCCAACCG CCGCGGTTTC ATCGCCGGGC TGCTGGCCGG CACCCTGGTG
TGGATGGTGA CCATGCTGCT GCCGCTTCTC GGCAACTTGC AGGGTTTCTA CATCCCGCTG
CTGGACATGA TCTATGTGCT GGACGACACC AGCTGGCACA TGGCCGCCAT CGCCTCGTTG
GCGGCCAACG TGCTGCTGTT CACCCTGATC TCACTGTTCA CCAACGCCAG CACCGAAGAG
GTCAGTGCGG CCGAAGCCTG TGCCGTGGAT AACGTGCGCC GCCCACAGCG CCGCGAGCTG
CACGCCGCCT CGCCGCAGGA ATTCGCCACC CAGCTGGCCA AGCCGCTGGG CGCCAAGGCC
GCGCAAAAGG AAGTCGAGCA AGCACTGCGC GACCTCTACC TGCCGTTCGA CGAACGCCGC
CCCTATGCCC TGCGCCGCCT GCGCGACCGC ATCGAAGCCA ACTTGTCCGG CCTGATGGGG
CCGAGCGTGG CCCAGGACAT GGTCGAGACT TTCCTGCCGT ACAAGTCCGG CAACGAAAAC
TACGTGACCG AAGACATCCA CTTCATCGAA AGCCGCCTGG AAGACTACCA CTCGCGCCTG
ACCGGGCTGG CCGCCGAGCT CGATGCCTTG CGCCGCTACC ATCGCCAGAC CCTGCAGGAG
TTGCCCATGG GCGTCTGCTC GCTGGCCAAG GACCAGGAAA TCCTGATGTG GAACAAGGCC
ATGGAAGAGC TCACCGGCAT CGCCGCCAAG CATGTGGTCG GCTCGCGCCT GGTCACCATC
GACGAGCCTT GGCGCGGCCT GCTGCAAGGC TTCATCAACG TGCCCGACGA GCACCTGCAC
AAGCAGCGCC TGGCGCTGGA CGGCCAGCCG CGCTGGCTGA ACCTGCACAA GGCAGCCATC
GACGAGCCAT TGGCCCCCGG TAACAGCGGG CTGGTACTGC TGGTGGAAGA CCTTACCGAA
ACCCAGGCAC TGGAAGACAA GCTGGTGCAC TCCGAGCGCC TGGCCAGCAT CGGCCGCCTG
GCCGCCGGCG TGGCCCACGA GATCGGCAAC CCGATCACCG GCATCGCCTG CCTGGCGCAA
AACCTGCGCG AGGAACGCGA AGACGATGGC GAAATCATCG AGTTGTCCAG CCAGATCCTT
GACCAGACCA AGCGCGTATC GCGCATCGTC CAGTCGCTGA TGAGCTTCGC CCATGCCGGC
GGCAGCCACC AGAACAGCGA GGAGCCCGTG TGCCTGGCTG AAGTGGCACA AGATGCCATC
GGTCTGCTGG CGTTGAACCG GCGCAATTTC GAAGTACAGT TCTTCAACCT TTGCGACCCG
GACCATTGGG CCGAAGGTGA CCCGCAGCGC CTGGCCCAGG TGCTGATCAA CCTGCTCTCC
AACGCCCGCG ATGCCTCGCC GCCCGGCAGC GCCGTGCGCG TGCGCAGCGA GGTTAACGAG
CACACCGTCG ACCTGATCGT CGAAGACGAA GGCAGCGGGA TTCCGAAGAA CATCATGGAC
CGCCTGTTCG AACCCTTCTT CACCACCAAG GACCCGGGCG AAGGAACCGG ACTGGGGCTC
GCTCTGGTCT ATTCCATCGT GGAAGAGCAT TATGGGCAAA TCACCATCGA CAGCCCGGCC
GATATCGAAC GGCAACGTGG CACCCGGATC CGCGTGACCC TGCCCCGGCA TGTCGTAGCG
ACGTCCCCTG AAATTCGAGA CCGTCGAGAG AATTGA
 
Protein sequence
MPMSFSLTQM ILISAGYLMV LFGVAWISER GLIPRSIIRH PLTYTLSLGV YASAWAFYGS 
VGLAYQYGYG FLACYLGVSG AFLLAPVLLY PILKITRTYQ LSSLADLLAF RFRSTWAGAL
TTIIMLIGVL PLLALQIQAV ADSISILTGE PVKARVAFAF CTLIILFTIF FGSRHIATRE
KHEGLVFAIA FESVIKLLAL GGIGLYALYG VFGGPHELEV WLLQNQTALA ALHTPLQEGP
WRTLLLVFFA SAIVMPHMYH MAFTENLNPR SLVSASWGLP LFLLLMSLAV PLVLWAGLRL
GASTNPEYFT LGLGIAANNQ ALALLAYIGG LSAASGLIIV TTLALSGMAL NHLVLPLYQP
PAEGNIYRWL KWTRRALIVA IITAGFMFYL SQNYHQSLAN LGIVAFVATL QFLPGVLSVL
YWPTANRRGF IAGLLAGTLV WMVTMLLPLL GNLQGFYIPL LDMIYVLDDT SWHMAAIASL
AANVLLFTLI SLFTNASTEE VSAAEACAVD NVRRPQRREL HAASPQEFAT QLAKPLGAKA
AQKEVEQALR DLYLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDMVET FLPYKSGNEN
YVTEDIHFIE SRLEDYHSRL TGLAAELDAL RRYHRQTLQE LPMGVCSLAK DQEILMWNKA
MEELTGIAAK HVVGSRLVTI DEPWRGLLQG FINVPDEHLH KQRLALDGQP RWLNLHKAAI
DEPLAPGNSG LVLLVEDLTE TQALEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
NLREEREDDG EIIELSSQIL DQTKRVSRIV QSLMSFAHAG GSHQNSEEPV CLAEVAQDAI
GLLALNRRNF EVQFFNLCDP DHWAEGDPQR LAQVLINLLS NARDASPPGS AVRVRSEVNE
HTVDLIVEDE GSGIPKNIMD RLFEPFFTTK DPGEGTGLGL ALVYSIVEEH YGQITIDSPA
DIERQRGTRI RVTLPRHVVA TSPEIRDRRE N