Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4692 |
Symbol | |
ID | 1043754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5330386 |
End bp | 5331558 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637148095 |
Product | hypothetical protein |
Protein accession | NP_746801 |
Protein GI | 26991376 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000246036 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCAAC CCTACAGTGC GCGCAGCCGC GCCATCGAAC CTTTCCACGT CATGGCGCTG CTGGCCCGGG CCAACGAGCT GCAGGCGGCC GGGCACGACG TGATCCACCT GGAAATCGGC GAGCCGGACT TCACCACGGC CGCACCCATC GTCGCGGCCG GCCAGGCCGC GCTGGCCGCA GGGCACACTC GCTACACCGC CGCACGCGGT CTGCCGGCAC TGCGTGAGGC AATTGCCGGT TTTTATGGGC AGCGCTATGG CCTGAACATC GACCCGGAAC GCATCCTTAT TACCCCCGGT GGCTCCGGCG CGCTGCTGCT GGCCAGCAGC CTGCTGGTGG ACCCGGGCAA GCACTGGCTG CTGGCCGATC CGGGTTACCC GTGCAATCGC CACTTCCTGC GCCTGGTCGA GGGCGGGGCC CAATTGGTAC CGGTGGGCCC GGATGTGAAC TATCAGCTGA CTGCCGACCT GGTTGAGCGC TACTGGGACA AGGACACCGT CGGTGCCCTG GTCGCTTCGC CGGCCAACCC GACCGGTACC GTGCTGGGGC GCGAGGCGTT GGCCTGCCTG GCCAGAACCA CCCACGAGCG GCATGGCCAT CTGGTGGTGG ACGAGATCTA CCACGGCCTC ACCTATGGCA TGGACGCGCC GAGCGTGCTG GAAGTCGACG ACTCGGCATT CGTCCTGAAT AGTTTTTCCA AGTATTTCGG CATGACCGGT TGGCGCCTTG GCTGGCTGGT GGCCCCGCCC GGTGCGGTCG CGGACCTGGA GAAACTGGCG CAGAACCTGT ACATCAGTGC GCCGAGCATG GCCCAGCATG CCGCGCTGGC CTGTTTCCAG CCCGAGGCGC TGGCCATTTT CGAGGAGCGC CGCGCCGAAT TCGCCCGCCG TCGCGACTAC CTGCTGCCCG CCCTTCGTGA ACTGGGCTTC CGCATTGCCG TCGAGCCGCA AGGTGCGTTC TACCTGTATG CCGATATCAG CGCTTTTGGG GGGGACGCGT TTGCATTCTG CCGGCACTTC CTGGAAACCC AGCACGTGGC GTTCACGCCG GGCCTGGACT TCGGTCGCCA CCTGGCCGGG CACCATGTGC GCTTCGCTTA CACCCAGAGC CTGCCGCGCC TGGAAGAAGC GGTGCAGCGT ATTGCCCGTG GCCTGCAGAG CTGGCAAGGC TGA
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Protein sequence | MAQPYSARSR AIEPFHVMAL LARANELQAA GHDVIHLEIG EPDFTTAAPI VAAGQAALAA GHTRYTAARG LPALREAIAG FYGQRYGLNI DPERILITPG GSGALLLASS LLVDPGKHWL LADPGYPCNR HFLRLVEGGA QLVPVGPDVN YQLTADLVER YWDKDTVGAL VASPANPTGT VLGREALACL ARTTHERHGH LVVDEIYHGL TYGMDAPSVL EVDDSAFVLN SFSKYFGMTG WRLGWLVAPP GAVADLEKLA QNLYISAPSM AQHAALACFQ PEALAIFEER RAEFARRRDY LLPALRELGF RIAVEPQGAF YLYADISAFG GDAFAFCRHF LETQHVAFTP GLDFGRHLAG HHVRFAYTQS LPRLEEAVQR IARGLQSWQG
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