| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4690 |
|---|
| Symbol | |
|---|
| ID | 1044139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5329366 |
|---|
| End bp | 5329710 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148093 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | NP_746799 |
|---|
| Protein GI | 26991374 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000178918 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTCC TTTGTACATC CCTCGGCCTG GCCGAGGGCC AAAGCCGCGC CTTCAGCGTA
GACGGCCTCG AACTGTTCGG CGTGCGTCGC CAAGGCCAGG TGTACCTGTA CCGCAACCGC
TGCCCGCACC GGGACATCCC GCTGAACTGG GCAGAGGACG CGTTTCTGGA TGACAGCGCC
AGCCTCATCC ACTGCGCCCA TCACGGTGCG CTGTTCCTGA TAGAAAGCGG CGAATGCGTG
GCAGGCCCCT GTGAGGGTGA GCAGTTGCAG CCCCTGGGCT GCCACGAAGA CAGCCAGGGC
ATCTGGTTCA AGGGGTCAGC AGCACCGGCA AGCGGCGATC GATGA
|
|---|
| Protein sequence | MHFLCTSLGL AEGQSRAFSV DGLELFGVRR QGQVYLYRNR CPHRDIPLNW AEDAFLDDSA
SLIHCAHHGA LFLIESGECV AGPCEGEQLQ PLGCHEDSQG IWFKGSAAPA SGDR
|
|---|
| |