Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4680 |
Symbol | ilvB |
ID | 1041966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5317647 |
End bp | 5319371 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148083 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | NP_746789 |
Protein GI | 26991364 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0107751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCTTT TATCTGGCGC TGAGATGGTC GTCCGCTTCT TGCGTGACGA AGGCGTTAAG CACATCTACG GGTACCCTGG TGGTGCTCTC CTGCATGTTT ACGACGCACT GTTCAAAGAA CCGGAAGTGG AACACATCCT GGTTCGTCAC GAGCAGGCGG CCACCCATAT GGCGGACGGC TACGCTCGCG CCACCGGCAA GGCCGGTGTG GTGCTGGTAA CCTCCGGTCC TGGCGCGACC AATGCCATTA CCGGTATTGC CACCGCCTAC ATGGACTCGA TTCCGATGGT CATCCTGTCC GGCCAGGTGC CTAGCACCAT GGTGGGCACC GATGCCTTCC AGGAAACCGA CATGATTGGT ATCTCGCGGC CGATCGTGAA GCACAGCTTC ATGATCAAGA ATCCGACCGA GATCCCTGAA GTTCTGAAAA AAGCTTTCTA CCTGGCGCAA TCCGGTCGTC CAGGTCCAGT CGTGGTCGAC ATTCCAAAAG ATATGACCAA CCCGGCTGAG AAGTTCGAAT ACGTCTACCC GAAAAAGGTC AAGCTGCGCT CCTACAGCCC GGCGGTCCGC GGTCACTCCG GCCAGATCCG CAAGGCTGCC GAGATGCTTC TGGCGGCCAA GCGCCCGGTC GTCTACTCCG GTGGCGGTGT GATCCTCGGC GGTGGCTCCG AAGCCCTGAC TGAAATCGCC AAGTCGCTGA ACCTGCCGGT CACCAATACC CTGATGGGGT TGGGTGGCTT CCCGGGTACC GACCGCCAGT TCCTCGGCAT GCTCGGCATG CATGGCAGCT ACACCGCCAA CATGGCCATG CATCATGCCG ATGTCATCTT TGCCGTCGGT GCGCGTTTCG ACGACCGCGT TGTAAACGGC CCGGCCAAGT TCTGCCCGAA CGCCAAGATC ATTCACATCG ACATCGACCC GGCGTCGATC TCGAAGATGA TCAAGGCCGA CGTGCCAATC GTCGGCCCGG TCGACAGCGT GCTCAGCGAA ATGCTCGGCA TCCTCAAGGA AATCGGCGAG CAGCCTGACA AGGCGGCGCT GGATGCCTGG TGGAAGCAGA TTGACGAATG GCGTGGCAAT GGCGAGTTGT TCCCTTACGA CAAGGGCGAT GGCAACGTCA TCAAACCGCA GAAAGTCATC GAGACACTGT GCGAAGTGAC CAATGGCGAT GCCTTCGTCA CTTCCGACGT GGGCCAGCAC CAGATGTTTG CCGCGCAGTA CTACCGCTTC AACAAGCCAA ACCGCTGGAT CAACTCCGGT GGCCTGGGCA CCATGGGCTT CGGCTTCCCG GCGGCGATGG GCGTCAAGCT CAACTTCCCG GATCAGGACG TGGCCTGTGT GACCGGCGAA GGCAGCATCC AGATGAACAT CCAGGAGCTG TCCACCTGCA TGCAATACGG CCTGCCGGTG AAGATCGTCA ACCTGAACAA CGGCGTGTTG GGCATGGTCC GCCAGTGGCA GGACATGGCC TACAACGGTC GTCACTCGCA CTCGTACGTC GAGTCGCTGC CTGACTTTAT CAAGCTGGCT GAGGCCTATG GCCATGTGGG TATCCGCATC ACCAGCCTGA AGGACCTCAA GCCGAAGCTG GAAGAAGCGT TTGCGATGAA GGACCGTCTG GTGTTCATCG ACATCGCGGT TGACCGCAGT GAGCACGTCT ATCCGATGCA GATCAAGGAT GGCTCGATGC GTGACATGTG GCTGAGCAAG ACGGAGCGTA CCTGA
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Protein sequence | MELLSGAEMV VRFLRDEGVK HIYGYPGGAL LHVYDALFKE PEVEHILVRH EQAATHMADG YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVILS GQVPSTMVGT DAFQETDMIG ISRPIVKHSF MIKNPTEIPE VLKKAFYLAQ SGRPGPVVVD IPKDMTNPAE KFEYVYPKKV KLRSYSPAVR GHSGQIRKAA EMLLAAKRPV VYSGGGVILG GGSEALTEIA KSLNLPVTNT LMGLGGFPGT DRQFLGMLGM HGSYTANMAM HHADVIFAVG ARFDDRVVNG PAKFCPNAKI IHIDIDPASI SKMIKADVPI VGPVDSVLSE MLGILKEIGE QPDKAALDAW WKQIDEWRGN GELFPYDKGD GNVIKPQKVI ETLCEVTNGD AFVTSDVGQH QMFAAQYYRF NKPNRWINSG GLGTMGFGFP AAMGVKLNFP DQDVACVTGE GSIQMNIQEL STCMQYGLPV KIVNLNNGVL GMVRQWQDMA YNGRHSHSYV ESLPDFIKLA EAYGHVGIRI TSLKDLKPKL EEAFAMKDRL VFIDIAVDRS EHVYPMQIKD GSMRDMWLSK TERT
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