Gene PP_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4680 
SymbolilvB 
ID1041966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5317647 
End bp5319371 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content59% 
IMG OID637148083 
Productacetolactate synthase 3 catalytic subunit 
Protein accessionNP_746789 
Protein GI26991364 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTTT TATCTGGCGC TGAGATGGTC GTCCGCTTCT TGCGTGACGA AGGCGTTAAG 
CACATCTACG GGTACCCTGG TGGTGCTCTC CTGCATGTTT ACGACGCACT GTTCAAAGAA
CCGGAAGTGG AACACATCCT GGTTCGTCAC GAGCAGGCGG CCACCCATAT GGCGGACGGC
TACGCTCGCG CCACCGGCAA GGCCGGTGTG GTGCTGGTAA CCTCCGGTCC TGGCGCGACC
AATGCCATTA CCGGTATTGC CACCGCCTAC ATGGACTCGA TTCCGATGGT CATCCTGTCC
GGCCAGGTGC CTAGCACCAT GGTGGGCACC GATGCCTTCC AGGAAACCGA CATGATTGGT
ATCTCGCGGC CGATCGTGAA GCACAGCTTC ATGATCAAGA ATCCGACCGA GATCCCTGAA
GTTCTGAAAA AAGCTTTCTA CCTGGCGCAA TCCGGTCGTC CAGGTCCAGT CGTGGTCGAC
ATTCCAAAAG ATATGACCAA CCCGGCTGAG AAGTTCGAAT ACGTCTACCC GAAAAAGGTC
AAGCTGCGCT CCTACAGCCC GGCGGTCCGC GGTCACTCCG GCCAGATCCG CAAGGCTGCC
GAGATGCTTC TGGCGGCCAA GCGCCCGGTC GTCTACTCCG GTGGCGGTGT GATCCTCGGC
GGTGGCTCCG AAGCCCTGAC TGAAATCGCC AAGTCGCTGA ACCTGCCGGT CACCAATACC
CTGATGGGGT TGGGTGGCTT CCCGGGTACC GACCGCCAGT TCCTCGGCAT GCTCGGCATG
CATGGCAGCT ACACCGCCAA CATGGCCATG CATCATGCCG ATGTCATCTT TGCCGTCGGT
GCGCGTTTCG ACGACCGCGT TGTAAACGGC CCGGCCAAGT TCTGCCCGAA CGCCAAGATC
ATTCACATCG ACATCGACCC GGCGTCGATC TCGAAGATGA TCAAGGCCGA CGTGCCAATC
GTCGGCCCGG TCGACAGCGT GCTCAGCGAA ATGCTCGGCA TCCTCAAGGA AATCGGCGAG
CAGCCTGACA AGGCGGCGCT GGATGCCTGG TGGAAGCAGA TTGACGAATG GCGTGGCAAT
GGCGAGTTGT TCCCTTACGA CAAGGGCGAT GGCAACGTCA TCAAACCGCA GAAAGTCATC
GAGACACTGT GCGAAGTGAC CAATGGCGAT GCCTTCGTCA CTTCCGACGT GGGCCAGCAC
CAGATGTTTG CCGCGCAGTA CTACCGCTTC AACAAGCCAA ACCGCTGGAT CAACTCCGGT
GGCCTGGGCA CCATGGGCTT CGGCTTCCCG GCGGCGATGG GCGTCAAGCT CAACTTCCCG
GATCAGGACG TGGCCTGTGT GACCGGCGAA GGCAGCATCC AGATGAACAT CCAGGAGCTG
TCCACCTGCA TGCAATACGG CCTGCCGGTG AAGATCGTCA ACCTGAACAA CGGCGTGTTG
GGCATGGTCC GCCAGTGGCA GGACATGGCC TACAACGGTC GTCACTCGCA CTCGTACGTC
GAGTCGCTGC CTGACTTTAT CAAGCTGGCT GAGGCCTATG GCCATGTGGG TATCCGCATC
ACCAGCCTGA AGGACCTCAA GCCGAAGCTG GAAGAAGCGT TTGCGATGAA GGACCGTCTG
GTGTTCATCG ACATCGCGGT TGACCGCAGT GAGCACGTCT ATCCGATGCA GATCAAGGAT
GGCTCGATGC GTGACATGTG GCTGAGCAAG ACGGAGCGTA CCTGA
 
Protein sequence
MELLSGAEMV VRFLRDEGVK HIYGYPGGAL LHVYDALFKE PEVEHILVRH EQAATHMADG 
YARATGKAGV VLVTSGPGAT NAITGIATAY MDSIPMVILS GQVPSTMVGT DAFQETDMIG
ISRPIVKHSF MIKNPTEIPE VLKKAFYLAQ SGRPGPVVVD IPKDMTNPAE KFEYVYPKKV
KLRSYSPAVR GHSGQIRKAA EMLLAAKRPV VYSGGGVILG GGSEALTEIA KSLNLPVTNT
LMGLGGFPGT DRQFLGMLGM HGSYTANMAM HHADVIFAVG ARFDDRVVNG PAKFCPNAKI
IHIDIDPASI SKMIKADVPI VGPVDSVLSE MLGILKEIGE QPDKAALDAW WKQIDEWRGN
GELFPYDKGD GNVIKPQKVI ETLCEVTNGD AFVTSDVGQH QMFAAQYYRF NKPNRWINSG
GLGTMGFGFP AAMGVKLNFP DQDVACVTGE GSIQMNIQEL STCMQYGLPV KIVNLNNGVL
GMVRQWQDMA YNGRHSHSYV ESLPDFIKLA EAYGHVGIRI TSLKDLKPKL EEAFAMKDRL
VFIDIAVDRS EHVYPMQIKD GSMRDMWLSK TERT