Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4675 |
Symbol | |
ID | 1045171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5313393 |
End bp | 5313986 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148078 |
Product | putative sulfite oxidase subunit YedZ |
Protein accession | NP_746784 |
Protein GI | 26991359 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0326305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0082642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTACC CCTGGTTTCG CTTGGCCATC TTCATCGTAG GCTGCCTGTT CCCGGTGTGG TGGCTATATG AAGCGGCGAT GAACCTGCTG GGGCCTGATC CCGGGAAGAT CATGATGGAT CGCCTTGGGC TTGGGGCGCT TACCTTCTTG TTGGTGACCT TGAGCATGAC CCCACTGCAG AAGCTGACGG GCTGGTCTGG CTGGATCGTG GTTCGCCGGC AGCTGGGGTT GTGGGTGTTC GCTTATATAG TGCTGCACAT CCTCTGTTAC CTGTTCTTTA TTCTTGGGCT GGATTGGGGG CAGTTGGCGG TGGAGCTGCG CAAGCGGCCG TACATTATCG TGGGGGCGCT GGGGTTCCTG GGTTTGCTGG TGCTGGCGGT CACCTCGAAC CGGTACAGCC AACGGCGGCT TGGGGCGCGG TGGAAGAAGC TGCACAGGTT GGTGTATGCG GTGCTTGGGT TGGGCTTGTT GCATTTCCTG TGGATCGTGC GCTCGGACCT TCGTGAGTGG GCGATCTATG CGTTTATTGG GGCTGTGTTG ATGGTATTGC GGATACCTGC TGTTGCGCGG GCGCTTCCCA AGGTTGCCAG GTAG
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Protein sequence | MRYPWFRLAI FIVGCLFPVW WLYEAAMNLL GPDPGKIMMD RLGLGALTFL LVTLSMTPLQ KLTGWSGWIV VRRQLGLWVF AYIVLHILCY LFFILGLDWG QLAVELRKRP YIIVGALGFL GLLVLAVTSN RYSQRRLGAR WKKLHRLVYA VLGLGLLHFL WIVRSDLREW AIYAFIGAVL MVLRIPAVAR ALPKVAR
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