| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4673 |
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| Symbol | recB |
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| ID | 1041961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5300096 |
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| End bp | 5303770 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148071 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | NP_746782 |
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| Protein GI | 26991357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.214082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG ACCGTCCTCT GGCACTGAGT TTCCCCCTGC ACGGTAGCCA GCTGATCGAG
GCCAGCGCCG GTACGGGCAA GACCTTCACC ATTTCGGCGC TGTACCTGCG CCTGATCCTC
GGTCACGGTG GCGAACAGGG CTTCGAACGC GAGCTGCTGC CACCGCAGAT CCTCGTGGTG
ACCTTCACCG ACGCCGCCAC CAAAGAGCTG CGCGAGCGTA TCCGCGCCCG CCTGGCTGAA
GCCGCAAGGT TCTTCCGTGG CGAACTGGAA GGCGCCGATC CACTGTTGCA CCAACTGCGT
GACGATTACC CACAAGAAAA CTGGCCGCGT TGCGCCGGCC GGTTGGAAAT CGCCGTGCAG
TGGATGGACG AGGCTGCGGT ATCGACCATC CATGGCTGGT GCCAGCGCAT GCTGCGCGAG
CATGCCTTCG ACAGCGGCAG CCTGTTCACC CAGACCCTGG AAACCGACCA CAGCGAGTTG
TTGGGCCAGG TCATGCGCGA TTACTGGCGG CGCTTCTGCT ATGGGATGCA AGGTGACGCA
CTGGCCTGGG TGCGCGGCAA CTGGGGGAGC CCAGATGCCT TGCTGCCGCG CATTCGCCCA
CTGTTCGGCC GTGTGCGCGC CCAGCAGAAT GGGCCAGAGC CCGCCGCATT GATCCAGGCA
TCGCTGCAGC AACGTGGCGC ACAGTTGGCC CGCATCAAGG CGCCATGGGC ACAGTGGGCC
GAGGAACTGC GGCAAATCTG CCGCGATGCG CTGGCCGCCA AACAGGTCGA CGGCCGCAAG
ATGCAAGCCC GTTACTTCGA GCCCTGGTTC GACAAGCTCT GCGCTTGGGC CAGCGATGAG
CAACTGGTAG AGCTCGACTT GGGCACCGGC TTTACCCGGC TGACCCCGGC GGGCATGGCC
GAGGCCTGGA AGGGAGAACC TCCCGAGCAC CCAGCCCTCA ACGCCATGCA GCACTTGCAG
CAGCAACTGC AGGCCCTGGA CAGCCCGGAT GCCCCGCTGC TCGAGCACGC CGCCAGTTGG
GTATCGGCGC GTTTCGAAGT GGAGAAGCGC CGGCGTGCAG AAATGGGCTT CGACGACATG
CTCGTGCGCT TGCAGCACGC GCTCGCCAGC GAGGCCGGCG AGCGCCTGGC CAGCCTGATC
CGTGAGCAGT TCCCGGTAGC GCTGATCGAC GAATTCCAGG ACACCGACCC GGTTCAGTAC
GGCATTTTCG AGCGCATCTA CCAGATCAGC GAAAATCGCG CAGAAACCGG TCTGTTCATG
ATCGGCGACC CCAAGCAGGC GATCTACGCC TTTCGTGGTG CCGACATCTA CACCTACCTA
GCCGCGCGAC GCGCTACCAG CGGCCGCCTG CACAGCCTGG ACACCAACTA CCGCTCCAGC
AAAGCCATGG TGGCGGCGGT CAATCAGGTG TTCCTGCAGG CCGAGGCGCG TGAAGCGGGG
CGGGGTGCAT TCCTGTTCCG CGAGGCCGAT GACAACCCGC TGCCATTCAT CGAGGTGCGC
GCCAAGGGGC GTGGCGAACA GCTGCTGATT GACGGTGAAG TCAGTGCAGC CCTGCAATGC
TGGCAGCTGG AAAGTGAAGA GCCAGTCTCC AGCAGCGTTT ACCGCCAGCA AATGGCCGCC
AGTTGCGCCA GCCATATTGT GGCCTTGCTC AATGGCGGCC AGCAGGGCAC GTCGGGGTTC
CGGAATGCCG AAGGCGAATT GCGCGCCTGC TTGCCCTCGG ACATTGCCAT CCTGGTGCGC
GATGGCCATG AGGCGCAGAT GGTCCGCGCC GAACTGGCCG CACGCGAGGT GCGCAGCGTC
TACCTGTCCG ACAAGGACTC GGTGTTTGCC GCCCAGGAAG CCCACGACCT GCTGGCCTGG
CTCAAGGCCT GCGCCGAGCC TGACTCGGAG CGCCTGCTCA AGGCTGCTCT GGCAAGCCTT
ACACTGGGCC TGTCGCTGGC TGCGCTGGAC CGGCTTAACC AGGACGAGCG GGTCTGGGAG
AGCTGGGTGA TGCGTTTTCG CCTGTACCGC GACACCTGGC AGCGCCAGGG GGTGTTGCCG
ATGTTGCGCC ACCTGCTGCA TGACTTCCAG CTACCGCGCA CACTGATCCG CCGCAGTGAT
GGCGAGCGGG TGCTGACCAA CCTGCTGCAC CTGGCCGAGC TGCTGCAGCA GGCCGCCGGC
GAACTGGACG GCGAACAGGC GCTTATCCGC CACCTGGCCG AGCATCTGGC CAGTTCCGGT
CAGGCCGGTG AAGAGCAGAT CCTGCGCCTG GAGAGCGACG AACAGTTGGT CAAGGTGGTG
ACCATCCACA AGTCCAAGGG CCTGGAATAT CCCTTGGTCT ACCTGCCATT CATCTGCACC
AGCAAACCGG TGGATGGTAG CCGTCTGCCG CTGGCCTGGC ATGACAGCGA AGGTAACGCT
CACCTCACCC TCACACCCGA CCAGGAGCAG ATCGAGCGCG CTGACGACGA GCGCCTGGCC
GAAGACCTGC GCCTGCTCTA CGTGGCCCTG ACCCGCGCCC AGCATGCTTG CTGGCTGGGT
GTCGCCGACC TCAAGCGCGG TAATCTGAAG AGCTCGCAGC TGCACCGCTC GGCGTTTGGC
TACCTGCTGG GGGGCGGCCT TGCCTTGGCT GGCTCGGCGC AGCTGACGGA CTGGTTGCAG
GCTTTGGCGG CAAGTTGCCC GCACATCACT TGCCCAGGCC TGCCGCAGGC GGATGAGCAG
ATGTATCGCA TGCCACACGC CGAACGTGAG CTGCTGCCAG CACGCAGACC ACGCCATGCG
GCTGCCGAGC ACTGGTGGAT CGCTTCCTAC AGTGCCCTTC GTGTCGGCGA TCAGACCCTC
GGCGCCGACA GCTCGCAGGC ACAGCAACTG CTGGACGACG AGGTGCCCGA TGCCCAGGTG
TTGCGCGAGG TCCCGGCCGA CAGCGGCGAT ATCCATCGCT TCCCGCGGGG GCCTAACCCC
GGCACCTTCC TCCATGGTTT GCTGGAGTGG GCAGGCCGTG AGGGCTTCAG CGAGGTCAGC
GCTAACCCTC AACTGATAGA GCGTACCGTT GGCCAGCGCT GCAATCGCCG CGACTGGGCC
GGCTGGATCC CCACCCTGAG CCACTGGATG CAGCGTTTGC TGAGCGAGGC GTTGCCGCTG
CCGGGCAGCG ACCAGAGCGT AACGCTGGGC CAGCTGCGTC ATTACCAGAT TGAAATGGAG
TTCTGGTTCG CCAGCCACCG GGTCGACGCA GAACAACTCG ATCGCCTGGT GGCACGCCAC
ACCCACCCCG GTCTGGCGCG CCCAGCTGCG CAGCCGACCG TGCTAAACGG CATGTTCAAA
GGGTTCATCG ACCTGGCGTT CGAGCTGGAC GGGCGTTACT ACGTGACCGA CTACAAGTCC
AACTGGCTGG GTGCGGACAT CCAGGCCTAC GATGCCATGG CCATGGAAAA GGCGATTCTT
GAGCACCGCT ACGACCTGCA GTATGTGCTG TACCTGCTGG CCCTGCACCG CCAGTTGCGC
GCGCGGCTGG CGGACTACGA TTATGACCGC CATGTTGGCG GCGCCCTGTT CATCTTCCTG
CGCGGTGCCA GCAGCAGCGG CCACGGCGTG TACCACGCCA AGCCACCGCG TGAGCTGATC
GAAAGCCTCG ATGCGCTGTT CCGTGGCGAG CACGCGCCGG TACAGCAGGA CCTGTTTGCC
GGAGTTGCGC CATGA
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| Protein sequence | MTQDRPLALS FPLHGSQLIE ASAGTGKTFT ISALYLRLIL GHGGEQGFER ELLPPQILVV
TFTDAATKEL RERIRARLAE AARFFRGELE GADPLLHQLR DDYPQENWPR CAGRLEIAVQ
WMDEAAVSTI HGWCQRMLRE HAFDSGSLFT QTLETDHSEL LGQVMRDYWR RFCYGMQGDA
LAWVRGNWGS PDALLPRIRP LFGRVRAQQN GPEPAALIQA SLQQRGAQLA RIKAPWAQWA
EELRQICRDA LAAKQVDGRK MQARYFEPWF DKLCAWASDE QLVELDLGTG FTRLTPAGMA
EAWKGEPPEH PALNAMQHLQ QQLQALDSPD APLLEHAASW VSARFEVEKR RRAEMGFDDM
LVRLQHALAS EAGERLASLI REQFPVALID EFQDTDPVQY GIFERIYQIS ENRAETGLFM
IGDPKQAIYA FRGADIYTYL AARRATSGRL HSLDTNYRSS KAMVAAVNQV FLQAEAREAG
RGAFLFREAD DNPLPFIEVR AKGRGEQLLI DGEVSAALQC WQLESEEPVS SSVYRQQMAA
SCASHIVALL NGGQQGTSGF RNAEGELRAC LPSDIAILVR DGHEAQMVRA ELAAREVRSV
YLSDKDSVFA AQEAHDLLAW LKACAEPDSE RLLKAALASL TLGLSLAALD RLNQDERVWE
SWVMRFRLYR DTWQRQGVLP MLRHLLHDFQ LPRTLIRRSD GERVLTNLLH LAELLQQAAG
ELDGEQALIR HLAEHLASSG QAGEEQILRL ESDEQLVKVV TIHKSKGLEY PLVYLPFICT
SKPVDGSRLP LAWHDSEGNA HLTLTPDQEQ IERADDERLA EDLRLLYVAL TRAQHACWLG
VADLKRGNLK SSQLHRSAFG YLLGGGLALA GSAQLTDWLQ ALAASCPHIT CPGLPQADEQ
MYRMPHAERE LLPARRPRHA AAEHWWIASY SALRVGDQTL GADSSQAQQL LDDEVPDAQV
LREVPADSGD IHRFPRGPNP GTFLHGLLEW AGREGFSEVS ANPQLIERTV GQRCNRRDWA
GWIPTLSHWM QRLLSEALPL PGSDQSVTLG QLRHYQIEME FWFASHRVDA EQLDRLVARH
THPGLARPAA QPTVLNGMFK GFIDLAFELD GRYYVTDYKS NWLGADIQAY DAMAMEKAIL
EHRYDLQYVL YLLALHRQLR ARLADYDYDR HVGGALFIFL RGASSSGHGV YHAKPPRELI
ESLDALFRGE HAPVQQDLFA GVAP
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