| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4672 |
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| Symbol | recD |
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| ID | 1041840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5298024 |
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| End bp | 5300099 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148070 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | NP_746781 |
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| Protein GI | 26991356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.156704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAA GCCTTGTCGA CCTGTTGCCC ACCCCGTTGC ACGCAGAGCA CCTGCTGGCG
CTGGCACCGC AGCACAACAG CGCTGACCTG CTGCAATTAC TCGACCGTTG GGTTGAGCGG
GGCTGGCTAC GTGCCCTGGA CCGCGCATTC GTGTCGTTCC TGGAAGAGCG CGCCCCCGGC
AGTGATCCCT TGCTATTGCT GGCGGCAGCG CTGGCCAGCC ACCAACTGGG GCACGGACAT
GTCTGCCTCG ACCTGCAACA AACCTTGGCC GAGCCTGATT TCGCCCTGTC GTTGCCGCCG
GAAGGTGACG CCCTTATCGG CCCTTTGCTA CTGCCATCGC AACTGCTGGC CAACCTTGAC
TTAAATGCCT GGCTTCAGCG CATCAGCGCC AGCCCGCTGG TGGCCGCAGG TGATACGCCT
GGCCAGCAAG CGCGGCCGCT TGTACGCAGT GGCGAGCGCC TTTACCTGCG CCGTTACTGG
AGTTACGAGC GGCGCATCGA CCAGGCCCTG CGCCAGCGCC TGAGTCAGGC CGAAGCACCG
CCTGCGGACC TGCCAGAGCG TCTGGCGCAA CTGTTCGAGG GCGGCGCGCC AGCTGGCCAG
GTGGACTGGC AGAAGCTCGC CTGTGCCTTG GCCACCCGTG CCGGTTTCAG CATCATCACT
GGCGGCCCCG GTACTGGCAA GACGACCACC GTGGTGCGCC TGCTGGCGTT GCTGCAGGCG
CCGGCAGTGG AGCAGGGCAG GCCACTGCGC ATCCGCCTGG CTGCACCGAC CGGCAAAGCC
GCTGCGCGCC TGACCGAATC CATTGGTCAG CAAGTCGAGC GCCTGCAAGT CAGCGCCGAA
GTACGTGGGC AAATCCCCAC TGAAGTCAGC ACCGTGCATC GCCTGCTCGG CAGCCGCCCG
GGCTCGCGGC ACTTTCGCCA TCATGCTGGC AACCCGTTGC CGTTGGATGT GCTGGTGGTC
GACGAAGCGT CGATGATCGA CCTGGAAATG ATGGCCAACC TGCTCGATGC CTTGCCGCCG
CGGGCGCGTC TGGTGCTGCT GGGCGACAAG GACCAGTTGG CCTCGGTCGA GGCCGGCGCG
GTGCTGGGTG ACCTGTGCCG GGATGCTGAG GAGGGCTTTT ACTCGCCGGC GACTGCAGCG
TGGCTTCAGC AGGTCAGTGG CGAGTCGCTG GCCGGCAGTG GCCTTAAGGC CGGCGATGAG
CAGCGTCACC CGCTGGCCCA GCAGGTGGTG ATGCTGCGTT TTTCACGGCG TTTCGGTGAA
GGCAGCGGTA TTGGCCAGCT GGCCAGACTG GTCAATCGTC AGGACGCTCA CGCGGCGCGC
AACCTGCTGG CCGCGCCGCC TGCCGACGTG CACAGCCTTT CGCTCAAGCA CGAACAGGAT
CGTGCGTTCG ACCGCCTGTT ACTCGACGGC CTGAACCGCG GTACCGATGG ACCGCAAGGC
TACCGCAGCT ACCTGCGCAC CCTTGGCCGT TACCGGCCGG CACTTGATAC CGCCTTTGAC
GACCCCGCCT GGGAGCAATG GGCGGGCAAG GTGTTGCGCA GTTTTGAGGA TTTCCAGTTG
CTGTGCGCGG TGCGCCGGGG CGCCTGGGGT GTCGAAGGCC TCAACGAGCG GGTGGCGCGA
GTGCTGCACA ATGCCGGTCT GATCGACAGC CAGCAGCCCT GGTACGAAGG GCGCCCGGTG
CTGGTGACCC GCAACGACTA CGGCCTTGGC CTGATGAACG GTGACATCGG TATTGCCCTG
CGCCTGCCGG ATGAGCATGG CCAGCCGCTG CTGCGCGTGG CCTTCCCGCG CAACGACGGC
AGTGGTGGTG TGCGATTCGT TCTGCCGAGC CGGCTCAACG AAGTGGAGAC GGTATTCGCC
ATGACCGTGC ACAAGTCCCA GGGCTCGGAG TTCAGCCACA CTGCCCTGGT GCTGCCGGAG
GCGCTCAACC CGGTGCTGAC CAAGGAACTG GTGTACACCG GCATCACCCG GGCCAAGCAC
TGCTTCAGCC TGGTCGAGCC ACGCCAAGGC ATTTTCGAAG AAGCGGTGGC GCGCAAAGTA
CGGCGTATTT CCGGGTTGAT GCTCGAGCAG GTCTAG
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| Protein sequence | MSRSLVDLLP TPLHAEHLLA LAPQHNSADL LQLLDRWVER GWLRALDRAF VSFLEERAPG
SDPLLLLAAA LASHQLGHGH VCLDLQQTLA EPDFALSLPP EGDALIGPLL LPSQLLANLD
LNAWLQRISA SPLVAAGDTP GQQARPLVRS GERLYLRRYW SYERRIDQAL RQRLSQAEAP
PADLPERLAQ LFEGGAPAGQ VDWQKLACAL ATRAGFSIIT GGPGTGKTTT VVRLLALLQA
PAVEQGRPLR IRLAAPTGKA AARLTESIGQ QVERLQVSAE VRGQIPTEVS TVHRLLGSRP
GSRHFRHHAG NPLPLDVLVV DEASMIDLEM MANLLDALPP RARLVLLGDK DQLASVEAGA
VLGDLCRDAE EGFYSPATAA WLQQVSGESL AGSGLKAGDE QRHPLAQQVV MLRFSRRFGE
GSGIGQLARL VNRQDAHAAR NLLAAPPADV HSLSLKHEQD RAFDRLLLDG LNRGTDGPQG
YRSYLRTLGR YRPALDTAFD DPAWEQWAGK VLRSFEDFQL LCAVRRGAWG VEGLNERVAR
VLHNAGLIDS QQPWYEGRPV LVTRNDYGLG LMNGDIGIAL RLPDEHGQPL LRVAFPRNDG
SGGVRFVLPS RLNEVETVFA MTVHKSQGSE FSHTALVLPE ALNPVLTKEL VYTGITRAKH
CFSLVEPRQG IFEEAVARKV RRISGLMLEQ V
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