| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4671 |
|---|
| Symbol | |
|---|
| ID | 1042478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5297357 |
|---|
| End bp | 5297923 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637148069 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746780 |
|---|
| Protein GI | 26991355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.12708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGG CCGCAAGGCG AGTGACAAGC TGTGCGCTTT CGCTATTGCT GGCCGTCCTG
TTCCTTTCTG CAGGCGCTGC CCGGGCAGAC CCCGGCACAA CCGCCGCCCA GGCACAGCAG
CGCGCCAAGG CAGTCACCCA GGTAGTACTG GGTATTTTCA GTTACGCCCG CTGGCCCGTC
GAACCTTCTC CTTTACGCCT GTGCCTGGTC GGCCCGACCG AGTACGCCGA CGATCTCATC
AAGGGCCATG TCCAGGAGTC CGGCCGGCCG CTGCAGGTGC GGCGCCTGCT GGCAGAAGAC
ACCCAGGTCG CCCAGGCCTG CGATGCCCTC TACATTGGCA AGCTTGACCA GGGCCAGCGC
GATCGGCTGT TCCAGCGTAT TGGCGGCCAC CCGGTGCTGA GCATCAGCGA GGCGGATGAC
CCATGCACGG TCGGCAGCCT GTTCTGCCTG CGGGTCCGCG ACCAGCAGGT GACCTTTGAA
GTCAATCTCG ACTCGGTGGC ACGCTCTGGC GTGCGCATTC ACCCCAGCGT GCTGCAATTG
TCGCGGCGCC GGGCGGAGCA GCCATGA
|
|---|
| Protein sequence | MNVAARRVTS CALSLLLAVL FLSAGAARAD PGTTAAQAQQ RAKAVTQVVL GIFSYARWPV
EPSPLRLCLV GPTEYADDLI KGHVQESGRP LQVRRLLAED TQVAQACDAL YIGKLDQGQR
DRLFQRIGGH PVLSISEADD PCTVGSLFCL RVRDQQVTFE VNLDSVARSG VRIHPSVLQL
SRRRAEQP
|
|---|
| |