| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4670 |
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| Symbol | |
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| ID | 1041910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5296089 |
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| End bp | 5297360 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148068 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_746779 |
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| Protein GI | 26991354 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.406009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA CCCGCAAGCG TACCGTGCGC CCGACCCTGC GCTCGGTGCT GGGCCGTGGC
CACCTCAGCG TCGCCTTGCT TGCCGTTGGC CTGGCGGGTA TCTCCCTCAC CCTGCTGGGC
GTGCTCGCCC TGCGTGTCTA TGCCAACCAT AACCTGCAGT TGATCGCCCG CTCGATCAAC
TACACCGTAG AAGCGGCTGT GGTGTTCGAT GACAGCGCCG CCGCCAACGA ATCGCTGGCG
TTGATTGCCA GTACCGAAGA AGTGGCCGAG GCCAAGGTCT TCAACAACGA GGGCGAGCAA
CTGGCGCACT GGCAACGCGA CAATACCGGC ATGCTCGCGC AGCTGGAGGT GCAGGTTGCC
AGCGCCTTGC TGGATGAGCC GGTCATTCTG CCGATCGTGC ACCAGCAACA GCAGGTCGGG
CATATCGAAC TGGCAGGCCA GGGCAGGAGC CTGTTGCTGT TCCTGCTCAG TGGCTTGGCC
GGTATCCTGT TCTGCACGGT CCTCAGCGCC CTGGCTGCCC AGTATCTGTC GCGGCGCCTG
CTCAGCGATA TCACCCGCCC GCTGCGTGGC CTGGCCAGTG TCGCCCATGC CGCCCGCCGC
GAGCGCAGCT TCGACCGGCG CGTACCAGAA GCGCCGATTG CCGAGCTGAA CGAGCTGGGT
AACGACTTCA ATGCCCTGCT GGATGAACTG GAGGTGTGGC ATAGCCACCT GCAGAGCGAA
AACCAGACCC TGGCCCATCA GGCCAGCCAC GACAGCCTGA CCGGCTTGCC CAACCGCGCC
TTCTTTGAAG GGCGCCTGAG CCGCAGCGTG CGAAATGCGG CGCGCCAGCA GGACCACCTG
GCAGTGCTGT TCCTCGACAG CGACCACTTC AAGCAGATCA ACGACACCCT CGGCCACGCC
GTGGGTGACG AGGTATTGAT CAGCGTGGCC GAACGTGTGC GCGCCCAGCT GCGCGAGCAA
GACCTGGTGG CGCGCCTGGG GGGCGACGAG TTTGCCGTGT TGTTGACGCC TTTGCATACG
CGCAAGGATG CCGAACACAT TGCCGAGAAG ATCGTTGCCA GCATGGAGCT GCCGGTGCAA
CTGGACAGTG GCCGCAGTGT TTCCACCTCG CTGAGTGTCG GTATTGCCTA TTACCCGGAT
GACGGCGCTG ACCCCGCCAG TCTTCTGAAT GCCGCCGATG CGGCAATGTA CCAGGCCAAG
CGCGAACGCC GTGGCCATTG GCAAGTGGCG CAGACGGAAC GGTCCGCCAA TGAAATCAGG
AACAGGAGTT GA
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| Protein sequence | MKPTRKRTVR PTLRSVLGRG HLSVALLAVG LAGISLTLLG VLALRVYANH NLQLIARSIN
YTVEAAVVFD DSAAANESLA LIASTEEVAE AKVFNNEGEQ LAHWQRDNTG MLAQLEVQVA
SALLDEPVIL PIVHQQQQVG HIELAGQGRS LLLFLLSGLA GILFCTVLSA LAAQYLSRRL
LSDITRPLRG LASVAHAARR ERSFDRRVPE APIAELNELG NDFNALLDEL EVWHSHLQSE
NQTLAHQASH DSLTGLPNRA FFEGRLSRSV RNAARQQDHL AVLFLDSDHF KQINDTLGHA
VGDEVLISVA ERVRAQLREQ DLVARLGGDE FAVLLTPLHT RKDAEHIAEK IVASMELPVQ
LDSGRSVSTS LSVGIAYYPD DGADPASLLN AADAAMYQAK RERRGHWQVA QTERSANEIR
NRS
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