| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4669 |
|---|
| Symbol | |
|---|
| ID | 1045078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5295593 |
|---|
| End bp | 5296111 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637148067 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | NP_746778 |
|---|
| Protein GI | 26991353 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.94461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.366802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG GAACAGGAGT TGAACCCGTG ATGCACGCTT TACGTTTTCC GCTTTGGGCC
TTGTTGTTCG CCATGCTGGC GCTGACGGGG TGCCAGAGCG CCCCCCAAAA GGGCCTTACC
CCAGAACAGA TTGCCGTGCT CAAGCGCGAA GGTTTCACCC CGACCGATGA AGGTTGGGCC
TACGACTTGT CTGGCAAAGT GCTGTTCGGC AGCGATCTGG ACAGCCTCAA CGGCCAGAGC
CAGGCGATTG TCGAGCGCAT CGGCAAGGCG CTGCTCGGCG TGGGTATCCA GGGCGTGCGG
GTGGACGGGC ATGCCGACTC GTCGGGCAAG GCGGCGTATA ACCAGCAGCT GTCCGAGCGC
CGCGCGCAAA GCGTGACCAA GGCGCTGGTG GGGATTGGCA TGCAGGCACA GAACATTCAG
AGCCGTGGCC TGGGCAGCAG CCAGCCGGTG GCGGACAACC GCACCAGCGC CGGGCGTACC
GAGAACCGTC GGGTGTCCAT CGTGGTAGCG TCCTACTGA
|
|---|
| Protein sequence | MKSGTGVEPV MHALRFPLWA LLFAMLALTG CQSAPQKGLT PEQIAVLKRE GFTPTDEGWA
YDLSGKVLFG SDLDSLNGQS QAIVERIGKA LLGVGIQGVR VDGHADSSGK AAYNQQLSER
RAQSVTKALV GIGMQAQNIQ SRGLGSSQPV ADNRTSAGRT ENRRVSIVVA SY
|
|---|
| |