| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4667 |
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| Symbol | mmsA-2 |
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| ID | 1045894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5292858 |
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| End bp | 5294384 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148065 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | NP_746776 |
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| Protein GI | 26991351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.418938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.815165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CGCAATCCCC AAACAGCACC AAGGTCGAGC AGGTCAAGCT GCTGATCGAC
GGCCAGTGGG TCGAGTCCAA AACCACCGAA TGGCGTGACA TCGTCAACCC GGCCACCCAA
GAGGTGCTGG CGCGCGTACC GTTCGCCACC GTCGAGGAAG TCGACGCAGC CGTGGCCGCC
GCTCAACGCG CATTCCAGAC CTGGCGTAAC ACCCCGATCG GCGCCCGCAT GCGCATCATG
CTCAAGCTGC AGGCGCTGAT CCGCGAACAC ACCAAACGCA TTGCCCAGGT GCTCAGCGCC
GAGCAGGGCA AGACCCTGGC CGACGCTGAA GGCGATATCT TCCGCGGCCT GGAAGTGGTC
GAGCACGCTG CATCCATTGG CACCCTGCAA ATGGGCGAAT TCGCCGAGAA CGTCGCTGGC
GGTGTCGATA CCTACACCTT GCGCCAGCCG ATCGGCGTAT GCGCTGGCAT CACCCCGTTC
AACTTCCCGG CAATGATCCC GCTGTGGATG TTCCCCATGG CCATCGTCTG CGGCAACACC
TTCGTGCTCA AACCATCCGA GCAGGATCCG CTGTCGACCA TGCTTCTGGT CGAGCTGGCG
CTGGAAGCCG GCGTACCGGC CGGCGTGCTG AACGTGGTGC ACGGCGGCAA GCAGGTGGTG
GATGCCATTT GCACCCACCA GGACATCAAG GCGATTTCCT TCGTGGGCTC TACTGAAGTC
GGTACGCACG TTTACAACCT CGGCAGCCAG CATGGCAAGC GTGTGCAGTC AATGATGGGG
GCCAAGAACC ACGCGGTGGT GCTGCCTGAT GCCAACCGCA CGCAAACCAT CAATGCGCTG
GTGGGGGCTG CCTTTGGCGC GGCGGGCCAG CGCTGCATGG CGACCTCCGT GGCCGTGTTG
GTGGGCAAGG CCCGCGAATG GTTGCCGGAT ATCAAGGAGG CCGCCAGCAA GCTCAAGGTC
AATGCTGGCT GTGAGCCGGG CACCGACGTT GGCCCGGTGG TTTCCAAGCG TGCCAAGGAG
CGTGTGCTGG GCCTGATCGA AAGCGGTATC AAGGAAGGCG CCAAGCTCGA GCTCGACGGC
CGTGACGTCA AGGTGCCGGG CTACGAGCAA GGCAACTTCG TCGGCCCAAC CCTGTTCTCG
GGCGTGAAGA CCGACATGCA GGTGTATACC CAGGAAATCT TCGGCCCGGT GCTGGTGACC
CTGGAAGTCG ATACGCTCGA CGAGGCCATC GCCCTGGTCA ACGCCAACCC GTTCGGCAAC
GGCACCGGCC TGTTCACCCA GAGCGGCGCG GCAGCACGCA AGTTCCAGAG CGAAATTGAT
ATTGGCCAGG TCGGCATCAA CATCCCGATC CCGGTACCCG TACCGTTCTT CAGCTTCACC
GGCTCGCGGG GTTCCAAACT CGGTGACCTG GGGCCGTACG GCAAGCAAGT GGTGCAGTTC
TACACTCAGA CCAAGACCGT CACTGCTCGC TGGTTCGATG ACGACAGCGT CAACGACGGT
GTGAACACCA CCATTAGCCT GCGCTAA
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| Protein sequence | MNAPQSPNST KVEQVKLLID GQWVESKTTE WRDIVNPATQ EVLARVPFAT VEEVDAAVAA
AQRAFQTWRN TPIGARMRIM LKLQALIREH TKRIAQVLSA EQGKTLADAE GDIFRGLEVV
EHAASIGTLQ MGEFAENVAG GVDTYTLRQP IGVCAGITPF NFPAMIPLWM FPMAIVCGNT
FVLKPSEQDP LSTMLLVELA LEAGVPAGVL NVVHGGKQVV DAICTHQDIK AISFVGSTEV
GTHVYNLGSQ HGKRVQSMMG AKNHAVVLPD ANRTQTINAL VGAAFGAAGQ RCMATSVAVL
VGKAREWLPD IKEAASKLKV NAGCEPGTDV GPVVSKRAKE RVLGLIESGI KEGAKLELDG
RDVKVPGYEQ GNFVGPTLFS GVKTDMQVYT QEIFGPVLVT LEVDTLDEAI ALVNANPFGN
GTGLFTQSGA AARKFQSEID IGQVGINIPI PVPVPFFSFT GSRGSKLGDL GPYGKQVVQF
YTQTKTVTAR WFDDDSVNDG VNTTISLR
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