Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4661 |
Symbol | |
ID | 1041831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5288501 |
End bp | 5289172 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148059 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | NP_746770 |
Protein GI | 26991345 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.983259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCCGTC ACCGCTGTAT CCCGCCCCCG CGAGCCTCTA ACCTGCCGGC ATCAATTTTT GATTCGGCCG TGGAGGCCAG CATGAAAAAG ATCCTTCTGC TCAATGGTGG TAAACAGTTC GCTCACTCCG AAGGCCGCCT CAACGCGACC TTGCACGAAG CGGCCATCGC TCACCTGGAC CGCGCCGGTT TCGATGTGCG CCAGACGTTC ATCGACGGCG GCTACGATGC CCAGGAAGAG GTGGAGAAAT TCCTCTGGGC CGATGTGGTG GTCTATCAGA TGCCCGGCTG GTGGATGGGC GCGCCGTGGA CCGTGAAGAA GTACATCGAC GAGGTGTTCA CTGCCGGTCA CGGCAGCCTG TATGCCAATG ACGGTCGTAC CCGTTCTGAC CACTCGCAGA AATACGGCAG CGGTGGTCTG GTGCACGGCA AGCAATACAT GTTGTCGCTG ACTTGGAACG CGCCGCAGCA GGCGTTCGAT GACCCCAGCG ATTTCTTTGA AGGCAAAGGG GTGGATGCCG TGTATTTCCC GTTCCACAAG GCCAACCAGT TCCTGGGCAT GACCGGCCTG CCGACCTTCC TGGCTGTGGA TGTGATGAAG CGCCCGGATG TGCCGGCGGC GTTGGCAGCT TATGAGGCCC ATCTGGACAA GGTGTTTGGC AAGGCACAGT AA
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Protein sequence | MPRHRCIPPP RASNLPASIF DSAVEASMKK ILLLNGGKQF AHSEGRLNAT LHEAAIAHLD RAGFDVRQTF IDGGYDAQEE VEKFLWADVV VYQMPGWWMG APWTVKKYID EVFTAGHGSL YANDGRTRSD HSQKYGSGGL VHGKQYMLSL TWNAPQQAFD DPSDFFEGKG VDAVYFPFHK ANQFLGMTGL PTFLAVDVMK RPDVPAALAA YEAHLDKVFG KAQ
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