Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4660 |
Symbol | |
ID | 1042047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5287421 |
End bp | 5288317 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148058 |
Product | LysR family transcriptional regulator |
Protein accession | NP_746769 |
Protein GI | 26991344 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.727682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACCC GATCCGAAGA ACTCCAGGTA TTCGTCGCCG TCATCGACTG CGGCTCGATT TCCGCTGCTG CCGAGCAGAT GGGCCAGACC CCGTCTGCCG TCAGCCGCAC CTTGTCGCGT CTGGAGGGCA AGCTGGGCAC CACGCTGGTC AACCGCACCA CCCGGCGCAT GGACCTTACC GAAGAGGGGC GCTACTTTCT TGAGCGCGCG CGGCTGATCC TGCAGCAGAT GGACGAGATG GAAGAGCGTC TGTCGATGAA CCGCCAGACC CCGACCGGGC GATTGCGCAT CAATGCCGCT GCGCCGTTCA TGCTGCATGC CATCCTGCCC TGGATTGGCG AGTTCCGCCG CCAGTACCCA GGCATCGAAC TGGAGCTCAA CACCGACGAC CTGATCATCG ACCTGCTGGA GCAGAGCACT GATGTGGCGA TCCGCATCGG AGAGCTGGCC GACTCCAGCC TGCACGCGCG CAGCCTGGGT TGCAGTCCGG TGCAGGTGCT GGCCAGTCCG GCCTACCTGG AGCAGCACGG CACGCCACGG CAGGTCGAGG ACCTGGCCAA CCACTGTCTG CTCGGCTTCA GCCAACCTGA GTCGCTCAAT CACTGGCCGC TACGCCACGC TCAGGGCGAT CGCTGGAGCA TCCGCCCGAC GCTGGTCGCT TCCAGCGGCG AAACCCTTCG CCAGCTGGCG TTGGCCGGGG AGGGCATCGT CAGCCTGTCG CACTTCATGA CCCACGAAGA TATCCGCACA GGGCGCCTGC AGGTGCTGCT GAGCGAGGCC AACAATGGCT ACCGTCAGCC GATCCACGCG GTGTATTACC GCAACACCCA GTTGGCGCTG CGCATCCAGT GCTTCCTGGA TTTCATCCAG CGCAAGCTGG CGATGTACGC CTGCTGA
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Protein sequence | MKTRSEELQV FVAVIDCGSI SAAAEQMGQT PSAVSRTLSR LEGKLGTTLV NRTTRRMDLT EEGRYFLERA RLILQQMDEM EERLSMNRQT PTGRLRINAA APFMLHAILP WIGEFRRQYP GIELELNTDD LIIDLLEQST DVAIRIGELA DSSLHARSLG CSPVQVLASP AYLEQHGTPR QVEDLANHCL LGFSQPESLN HWPLRHAQGD RWSIRPTLVA SSGETLRQLA LAGEGIVSLS HFMTHEDIRT GRLQVLLSEA NNGYRQPIHA VYYRNTQLAL RIQCFLDFIQ RKLAMYAC
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