| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4648 |
|---|
| Symbol | |
|---|
| ID | 1046256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5272852 |
|---|
| End bp | 5273976 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148046 |
|---|
| Product | rRNA (guanine-N(2)-)-methyltransferase |
|---|
| Protein accession | NP_746757 |
|---|
| Protein GI | 26991332 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGT TGACCACCCC CTACGCCGAA CTCGACCTGA TCCGCCAGCC GGAGCAGGCC
AACGACCCGT TGCAGGCCTT CGATGCCGCC GACGAGTACC TGCTTGCGCA GCTACACGAT
CAGGCACCCG ACGCCAATTG CCGGGTACTG GTGCTCAATG ACAGCTTCGG TGCCCTGGCC
GCAAGCCTTG CAGGCCAGCT GCAGGTGGTC AGCAGCGGTG ACTCGCACCT GGGGCACCTG
GCCCTGGAAA AGAACCTGGC GCGCAATGGC CTGCCGTTCG ACAGTGTGCC GTTCGTACCG
GCCAGCGAAC ACTGGCAAGG CCCGTTCGAC CGGGTGCTGG TGCGTGTGCC CAAGACCCTG
GCCCTTCTGG AAGAACAACT GATCCGCCTG CAAGGCCAGT TGGCACCAGG TGCGCAGGTG
ATTGCAGGGG CGATGATCAA GCACCTGCCG CGCGCGGCCG GCGACCTGAT GGAGAAGTAC
ATCGGCCCCG TACAGGCTTC GCTGGCACTG AAAAAGGCCC GTTTGCTGAC AGCAACGGTT
GCCGAGCGGC CGCTCGCCAA GTCCCCCTAC CCCAGCTGCT ACCGCCTCGA CGCGCCGGCA
CTTGACTTGG TCAACCACGC CAACGTGTTC TGCCGTGAAG GCCTGGATAT CGGGACGCGG
GCGTTCCTCC CGCATCTACC ACGCAACCTC GGCCGTGCGC GGGTGGCAGA CCTGGGCTGC
GGCAACGGCG TGCTCGCGAT CGCCAGCGCC CTGGCCAACC CGGAGGCCGA GTACACCCTG
GTCGACGAGT CGTACATGGC AGTGCAATCG GCGCAGGAGA ACTGGCTGGC AGCGTTGGGC
GAGCGCCCGG CGACCTTCCT CGCGGCCGAT GGCCTGGCCG GGCTGGAGAA ACAGTCGCTG
GACGTGGTGC TGTGCAACCC GCCGTTCCAC CAACAGCAGG TAGTAGGCGA TTTCCTCGCC
TGGCGCATGT TCCAGCAGGC GCGTGAAGCG CTGGTGGTAG GTGGGGCGCT GTACATCGTA
GGTAACCGGC ATCTGGGCTA TCACAGCAAG CTGGCGCGGT TGTTCCGGGG GGTGGAGCAG
GTGGCGGCAA CGCCCAAGTT CGTCATTCTG AAAGCCCGCA AGTAG
|
|---|
| Protein sequence | MPLLTTPYAE LDLIRQPEQA NDPLQAFDAA DEYLLAQLHD QAPDANCRVL VLNDSFGALA
ASLAGQLQVV SSGDSHLGHL ALEKNLARNG LPFDSVPFVP ASEHWQGPFD RVLVRVPKTL
ALLEEQLIRL QGQLAPGAQV IAGAMIKHLP RAAGDLMEKY IGPVQASLAL KKARLLTATV
AERPLAKSPY PSCYRLDAPA LDLVNHANVF CREGLDIGTR AFLPHLPRNL GRARVADLGC
GNGVLAIASA LANPEAEYTL VDESYMAVQS AQENWLAALG ERPATFLAAD GLAGLEKQSL
DVVLCNPPFH QQQVVGDFLA WRMFQQAREA LVVGGALYIV GNRHLGYHSK LARLFRGVEQ
VAATPKFVIL KARK
|
|---|
| |