Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4647 |
Symbol | |
ID | 1046148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5271916 |
End bp | 5272755 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637148045 |
Product | LuxR family transcriptional regulator |
Protein accession | NP_746756 |
Protein GI | 26991331 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCGC CGAACTCGCA GAAAATCCTG TTCGCTATAA CAAAAAAATC CCAACAGGAT GGTAGGTCTT TTCCTACAAT CATCCGGGTA CTCAAACGGA TTGGATCCTG CGCGCCCCAA GGAGTGTTTC AAATGCTTCA CTGGAAACCC GAGTATCTTC GTGCGTTCGT CAGCGAGCGC AGCCCGCAGA AGCTATTCGA CATCGCAGTC CATCTGGCTC AGGACCTGGA CATGGATTAC CTTGGGCTGA ACATCCGCAT TCAGATCGCT ACACAAACGC CAAGGCTGTA CCTCTACAGC AACTACCCAA GTGAGTGGAT CGAGCGCTAC CAGCGCGACG ACTTCTACAA GCAGGACCCG GCGGCGAACC TGAGCCACAG CTCGACGATG CCGGTGCTGT GGACCGATGA ACTTTACAAG GAAGCCCCGC AATTTCGCGA AATGGCCTGC CTGTATGGCT TGCGGCACGG CTGGACACAG TCGCTTCACG ATCAGCAGCA CAACGAAAGC CAGATCAGTG TCGCTCGGCC AAATGGCCCC ATCGATGAGG TCGAACTGTA CGACAAAGCT GGGAGCGTGC AGTGGCTGTG CCACACACTT CACGCGGTAC TGGGCGAGCA CCATCTGAAC GCGCTATGCC CACCCCAACC GAAAATGAGC GAGCGCGAAC TGGAAGTGCT GAAATGGTCT GCCGCCGGCA AGACCGCTGC CGATGTTGCC TCCATCCTCT CGCTGTCGCA AAGCACGGTC AATTTCCATA TCCGCAGCGT GATCACCAAG ACCAACGCAG CCAACAAGGC CGGAGCCATT GCCATTGCCG CCTTGCGTGG CTGGATCTGA
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Protein sequence | MNAPNSQKIL FAITKKSQQD GRSFPTIIRV LKRIGSCAPQ GVFQMLHWKP EYLRAFVSER SPQKLFDIAV HLAQDLDMDY LGLNIRIQIA TQTPRLYLYS NYPSEWIERY QRDDFYKQDP AANLSHSSTM PVLWTDELYK EAPQFREMAC LYGLRHGWTQ SLHDQQHNES QISVARPNGP IDEVELYDKA GSVQWLCHTL HAVLGEHHLN ALCPPQPKMS ERELEVLKWS AAGKTAADVA SILSLSQSTV NFHIRSVITK TNAANKAGAI AIAALRGWI
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