| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4641 |
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| Symbol | cstA |
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| ID | 1041584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5264543 |
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| End bp | 5266609 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148039 |
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| Product | carbon starvation protein CstA |
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| Protein accession | NP_746750 |
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| Protein GI | 26991325 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.91453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA ATAATAGCCT GCTACGCCAT ATTCCGTGGC TGGCGCTGGC AGTCATAGGC
GCCTGCGCAC TGGGTGTGGT TGCCCTGCGT CGCGGCGAGG CGATCAACGC CTTGTGGATC
GTGGTCGCGG CAGTGGCCAT CTACCTGGTC GCCTATCGTT ACTACAGCCT GTTCATCGCC
ACCAAGGTGA TGCAACTCGA CCCGCGCCGT GCCACCCCGG CGGTGCTCAA CAACGACGGC
CTGGACTACG TCCCGACCAA CAAACACATT CTTTTCGGTC ACCACTTCGC TGCCATCGCC
GGCGCAGGCC CCTTGGTCGG GCCGGTACTC GCCGCGCAAA TGGGCTACCT GCCCGGCACG
CTCTGGCTGA TCGCCGGCGT GGTGCTGGCC GGTGCGGTGC AGGACTTCAT GGTCCTGTTC
CTGTCTACCC GCCGCAACGG GCGCTCGCTG GGCGACATGG TGCGCGAGGA AATGGGCAGA
ATCCCGGGCA CCATCGCCCT GTTCGGCTGT TTCCTGATCA TGATCATCAT CCTCGCGGTG
CTGGCGTTGA TCGTGGTCAA GGCCCTGGCC GAAAGCCCAT GGGGCATGTT CACGGTGATG
GCGACCATCC CGATCGCGAT GTTCATGGGC ATCTACATGC GCTACATCCG TCCGGGCCGT
ATTGGCGAAA TCTCGGTCGT TGGTGTGGTA CTGCTGCTGG CCTCGATCTG GCTGGGCGGC
GTGATCGCTG CGGACCCGGT GTGGGGCCCG GCGTTCACGT TCACCGGCGT GCAGATCACC
TGGATGCTGG TGGGCTACGG TTTTGTCGCC GCCGTGCTGC CAGTGTGGCT GGTGCTGGCG
CCGCGTGACT ACCTGTCGAC CTTCCTCAAG ATCGGCACGA TCCTTGGCCT GGCCATCGGT
ATCCTGATCA TCGCACCTGA GCTGAAAATG CCGGCGCTGA CCCAGTTCAC CGACGGTACG
GGCCCGGTGT GGAAGGGTAC CCTGTTCCCG TTCCTGTTCA TCACCATTGC CTGTGGTGCG
GTGTCCGGCT TCCACGCGCT GATTTCCTCG GGGACCACCC CCAAGCTGCT GGATAACGAA
ACCAACGCCC GCTATATCGG CTACGGCGGC ATGCTGATGG AATCGTTCGT CGCCATCATG
GCCATGGTTG CGGCCTCGGT GATCGAACCG GGCGTGTACT TCGCCATGAA CAGCCCGGCG
GCAGTGGTCG GTACCGATGT CGCGTCGGTG GCGCAGACTG TCAGCAGTTG GGGCTTCCTG
ATTACACCCG AGCAGCTCGA AGCCGTTGCC CGTGACATCG GCGAGCACAC CATCCTGGCC
CGTGCCGGCG GTGCGCCAAC CCTGGCGGTC GGTATCGCGC AGATCCTGCA CCAGGTGTTG
CCAGGTGAAA ACACCATGGC CTTCTGGTAC CACTTCGCGA TCCTGTTCGA GGCGCTGTTC
ATTCTCACGG CGGTAGACGC TGGTACCCGT GCCGGGCGCT TCATGCTGCA GGACCTGCTG
GGCAGCTTCG TGCCTGCGCT CAAACGCACC GAATCGTGGG GGGCAAACCT GCTTGCCACT
GCTGGCTGCG TGGCGCTCTG GGGCTATCTG CTGTACCAGG GCGTCATCGA CCCGCTGGGT
GGCATCAACA CCCTGTGGCC GCTGTTTGGT ATCTCCAACC AGATGCTGGC CGGTATCGCC
TTGATGCTCG GTACTGTGGT GCTGATCAAG ATGAAGCGTC AGCGCTACAT CTGGGTCACC
CTGCTGCCGG CCGTATGGCT GCTGATCTGC ACCACGGCTG CAGGCCTGAT CAAGCTGTTC
GACCCCAACC CGGCTGTCGG CTTCCTGGCC TTGGCCAAGA AGTACAGCAC TGCGCTGGAC
GCCGGCCAGG TACTGGCCCC GGCCAAGGAC ATCGGGCAGA TGCAGCACGT GATCTTCAAC
GCCTACACCA ACGCGGGCCT GACGATCTTG TTCCTGCTGG TGGTCTTCAG CATCCTGTTC
TTCGCCATCA AGGTCGGCTA CGCCGCCTTG GGCCGCAAAG AACGCAGCGA CAAGGAAACC
CCGTTCCAGG CGTTGCCTGA CGCGTAA
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| Protein sequence | MNNNNSLLRH IPWLALAVIG ACALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA
TKVMQLDPRR ATPAVLNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT
LWLIAGVVLA GAVQDFMVLF LSTRRNGRSL GDMVREEMGR IPGTIALFGC FLIMIIILAV
LALIVVKALA ESPWGMFTVM ATIPIAMFMG IYMRYIRPGR IGEISVVGVV LLLASIWLGG
VIAADPVWGP AFTFTGVQIT WMLVGYGFVA AVLPVWLVLA PRDYLSTFLK IGTILGLAIG
ILIIAPELKM PALTQFTDGT GPVWKGTLFP FLFITIACGA VSGFHALISS GTTPKLLDNE
TNARYIGYGG MLMESFVAIM AMVAASVIEP GVYFAMNSPA AVVGTDVASV AQTVSSWGFL
ITPEQLEAVA RDIGEHTILA RAGGAPTLAV GIAQILHQVL PGENTMAFWY HFAILFEALF
ILTAVDAGTR AGRFMLQDLL GSFVPALKRT ESWGANLLAT AGCVALWGYL LYQGVIDPLG
GINTLWPLFG ISNQMLAGIA LMLGTVVLIK MKRQRYIWVT LLPAVWLLIC TTAAGLIKLF
DPNPAVGFLA LAKKYSTALD AGQVLAPAKD IGQMQHVIFN AYTNAGLTIL FLLVVFSILF
FAIKVGYAAL GRKERSDKET PFQALPDA
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