Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4608 |
Symbol | |
ID | 1042203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5230209 |
End bp | 5230784 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148006 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | NP_746717 |
Protein GI | 26991292 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC CAGGGGATAT CATCGAGCCT CACGCTGACA GCGCAGGCGC ACGTGCACGT TTCGTCCAGG TGTTCCAGGC CCAGCGTGCG CGTATGGAGG CGTTGGTAAG CCGTCGGGTC GGCTGCCGCG CCACCGCTTC GGACCTGGTC CAGGAATTGT TCCTTCGTTT CTGGCGTCGC CCCGAGGTCA AGGTCGAGGC GCTGGACACT TACCTGCTGC GTTGCGCGGG CAACCTGGCC ATAGACCACC TGCGCAGCGA AAGTAGCCGC GAACGCGTAG CCGAAGCCGC TGTGCCGGTG AGCGAGGCGA GCCTGGCCCA GGCCCCTGAG CAGGCCGTGG AGGTCGACCA CGACTTGCAG CGTATCGAGG CCACCTTGCG TGCCTTGCCC GAGCGCACCC GGCAGATCTT CCTGCTCAAC CGCATTCACG GCTGCAAGTA CAGCGAGATC GCCAAAGCCA TGCAGCTGTC ACAGAGCGCC GTGGAAAAGC ATATGATGCG CGCCCTTGAA GCGTGCAAGG CGAGTGTTGC CGAGCCCGCG TCCACCCCAC GCCGGCCAGG GAGCGCCCGT CGATGA
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Protein sequence | MSEPGDIIEP HADSAGARAR FVQVFQAQRA RMEALVSRRV GCRATASDLV QELFLRFWRR PEVKVEALDT YLLRCAGNLA IDHLRSESSR ERVAEAAVPV SEASLAQAPE QAVEVDHDLQ RIEATLRALP ERTRQIFLLN RIHGCKYSEI AKAMQLSQSA VEKHMMRALE ACKASVAEPA STPRRPGSAR R
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