Gene PP_4565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4565 
SymbolaceK 
ID1042619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5184742 
End bp5186457 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content61% 
IMG OID637147963 
Productbifunctional isocitrate dehydrogenase kinase/phosphatase protein 
Protein accessionNP_746674 
Protein GI26991249 
COG category[T] Signal transduction mechanisms 
COG ID[COG4579] Isocitrate dehydrogenase kinase/phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC CCTGGCCCGC TGTCGAAATC GCCCGGATGA TCCTCGCCGG CTTCGACGAC 
TACCGCGATC ATTTCCAGCG CATCACCCTG GGTGCTCGCC AGCGCTTCGA ACAGGCGCGC
TGGCAGGATA TCCAGCAGGC CGCCGCTGCC CGCATCAATC TCTACGAAGA GAAAGTCGCC
GAAGTCAACG GTTGGCTGCG CCAGGCCTTT GCTGCAGAGG TGCTGCTGGA TGTGGAACAG
TGGCCGCTGG TGAAAAACGC CTATATCCAC CTGATCGACC CCCGCCTGGA CGACGAGTTG
GCAGAGACCT GGTACAACTC GCTGTTTTGC AGCCTCTTCA GCCATGACCT GATCAGCGAC
GGCTGCATGT TCATCCACAC TACCCGGCCT TCCATGCGCG GCCGCGAGCG CGCCGCGCAA
ACCCGTACCT ATCGGCTTGA CGGCAGTCTC AGGAACTTGC TGCGCGCGGT GTTCGCCGAT
TACCCGTTCG ACATGCCCTA TGGCGACCTG GAAGGCGACC TGGCGCGGCT GGAAGAACAA
CTGCGCGAAT GCCTGCCCGA CTGGGTGTGC AAGGACCCGG CGCTGGCCGT GGAGCTGTTT
GTACCCGTGC TTTACCGCAA CAAGGGGGCC TATCTGGTCG GCCGCCTGTA CAACAGCGAT
GAGCAGTGGC CGTTGGTGAT TCCCTTGCTG CACCGCGAGG GCCACGGCAT CGAGGCCGAT
GCGCTGATTA CCGACGAGGC CGAGGTGTCG ATCATCTTTT CGTTCACCCG CTCTTACTTC
ATGGCCGATG TCCCGGTGCC CGCCGAGTTC GTCAATTTCC TCAAGCGCAT CCTGCCGGGC
AAGCACATTG CCGAGCTGTA TACCTCGATC GGGTTCTACA AGCAGGGCAA GTCGGAGTTC
TACCGCGCAC TGATCAACCA CCTGGCCAGC AGTGATGACC GCTTTGTCAT GGCACCAGGG
GTGCGGGGCA TGGTCATGAG CGTGTTCACC TTGCCCGGCT TCAATACGGT GTTCAAGATC
ATCAAGGACC GCTTCTCGCC ATCGAAAACC GTGGATCGCG CCACGGTGAT CGACAAGTAT
CGGCTGGTGA AGAGTGTCGA CCGGGTGGGG CGTATGGCCG ACACCCAGGA GTTTGCCGAT
TTTCGCTTTC CGCGCAGCAA GTTCGAGCCG GATTGCCTGG CCGAGTTGCT GGAGGTGGCG
CCGTCGACGG TGGCGCTGGA GGGCGACACG GTGCTGATCC GCCACTGTTG GACCGAGCGG
CGCATGACGC CGTTGAACCT GTACCTGGAG CAGGCCACCG AAGGCCAGGT GCTGGAGGCG
CTGGAGGACT ACGGCCTGGC CATCAAGCAG TTGGCGGCGG CGAACATCTT CCCCGGCGAC
ATGTTGCTGA AGAACTTTGG TGTGACCCGT CATGGCCGGG TCGTGTTCTA CGACTATGAC
GAAATCAGCT TCCTGACCGA GGTGAATTTC CGCCACATTC CGCCACCGCG TTACCCGGAG
GACGAAATGT CGGGCGAGCC GTGGTACTCG ATCGGGCCGC ATGATGTGTT CCCCGAAGAG
TTTCCGCCGT TTCTGTTTGC CGATATGGGC CAGCGGCGGT TGTTCAGCCG CTTGCATGGG
GAACTGTATG ACGCGGATTA CTGGAAGGGG CTGCAGGCGG CGATACGTGA GGGGAAAGTG
ATCGATGTGT TTCCGTATCG GCGCAAGGCC CGGTGA
 
Protein sequence
MSQPWPAVEI ARMILAGFDD YRDHFQRITL GARQRFEQAR WQDIQQAAAA RINLYEEKVA 
EVNGWLRQAF AAEVLLDVEQ WPLVKNAYIH LIDPRLDDEL AETWYNSLFC SLFSHDLISD
GCMFIHTTRP SMRGRERAAQ TRTYRLDGSL RNLLRAVFAD YPFDMPYGDL EGDLARLEEQ
LRECLPDWVC KDPALAVELF VPVLYRNKGA YLVGRLYNSD EQWPLVIPLL HREGHGIEAD
ALITDEAEVS IIFSFTRSYF MADVPVPAEF VNFLKRILPG KHIAELYTSI GFYKQGKSEF
YRALINHLAS SDDRFVMAPG VRGMVMSVFT LPGFNTVFKI IKDRFSPSKT VDRATVIDKY
RLVKSVDRVG RMADTQEFAD FRFPRSKFEP DCLAELLEVA PSTVALEGDT VLIRHCWTER
RMTPLNLYLE QATEGQVLEA LEDYGLAIKQ LAAANIFPGD MLLKNFGVTR HGRVVFYDYD
EISFLTEVNF RHIPPPRYPE DEMSGEPWYS IGPHDVFPEE FPPFLFADMG QRRLFSRLHG
ELYDADYWKG LQAAIREGKV IDVFPYRRKA R