Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4560 |
Symbol | |
ID | 1046249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5180984 |
End bp | 5181940 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637147958 |
Product | ribonuclease BN, putative |
Protein accession | NP_746669 |
Protein GI | 26991244 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0395716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTCC CCGACCTGCG CGGCTTGCCC CTGCACCGCG TGCTGGTTCG CACCGTCAAG GAATTCCTCG ACGACGAGAT GTCCACCTAT GCCTCAGCGC TGGCCTACCA GGCGCTGTTC TCGCTATTCC CCTTCCTGTT GTTCCTGATT GCCCTGATCG GTTTCCTACA TTTGCCGGAC TTTTTCTCCT GGCTGCGTCT GCAATCGGAA CTGGTGTTGC CGCCCCAGGC GCTGGAGCAG GTGAACCCGG TGATCGACCA GCTGCAACAA TCCAAGGGTG GGCTGCTGTC GGTGGGTATC GTGATCGCCC TGTGGACCGC CTCCGCCGGC GTGCGCCTGA TGATGAGCGC CATGAACGCC GCTTACGATG TGTCCGAAGG TCGCCCGGTG TGGAAGCGTA TCCCGCTTTC CATTTTCTAC ACCGTGGGCC TGGCTGGCAT GCTGCTGGCG GCCGCAGCTC TGATGGTGCT GGGCCCGCAG GTGATGGAAT GGATAGCTGC CCAGATCGGC ATGCAGGAGT TCATCGTCAC ACTGTGGACC ATCCTGCGCT GGCCGGTGAT CATCATTCTG CTGATGGTGG CAGTGGCCCT GATCTATTAC GTGATGCCTG ATGTGAAACA GCAGTTTCGC TTCATCACCC CGGGCTCGGT GCTGGCGGTT GTGGTGTGGA TCGTGGCCTC CCTGGGCTTT GCCTACTACG TGAAGACCTT TGCCGACTAC AACGCCATGT ACGGCAGCAT TGGTGCAATC ATCGTGCTGT TGCTGTATTT CTATATTTCG GCTGCCGTGC TGCTGCTCGG CGCCGAAATG AATGCGGTGA TCGAGCACAT GTCAGCCGAA GGCAAGAACC CGGGCGAGAA AGACTTCGAC GGGGAAAAGC CCAAGGAAAC CTTGACTGTA CTGGGTCACG AGCACCCAAA CCCGAGCAAG CCTCATAGCG TCGAGCCGAA CCCCTGA
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Protein sequence | MIFPDLRGLP LHRVLVRTVK EFLDDEMSTY ASALAYQALF SLFPFLLFLI ALIGFLHLPD FFSWLRLQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSVGI VIALWTASAG VRLMMSAMNA AYDVSEGRPV WKRIPLSIFY TVGLAGMLLA AAALMVLGPQ VMEWIAAQIG MQEFIVTLWT ILRWPVIIIL LMVAVALIYY VMPDVKQQFR FITPGSVLAV VVWIVASLGF AYYVKTFADY NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKNPGEKDFD GEKPKETLTV LGHEHPNPSK PHSVEPNP
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