Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4550 |
Symbol | fadD2 |
ID | 1046183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5173289 |
End bp | 5174977 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147948 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | NP_746659 |
Protein GI | 26991234 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCG ACTTCTGGAA TGACAAGCGC CCGGCAGGCG TGCCTTCCAC CATCGACATC AATGCCTACG CCTCGGTCGT CGAGGTGTTC GAGCGCTCCT GCAAGCGCTT TGCCGACCGC CCGGCGTTCA GCAACCTGGG CGTGACCCTC AGCTACGCGG AACTGGAGCG CCATTCGGCA GCCTTCGCTG CCTGGTTGCA GCAGCACACC GACCTCAAAC CGGGTGAGCG CATCGCCGTA CAGATGCCCA ATGTGCTGCA GTACCCCATC GCCGTCTTCG GTGCCATGCG CGCCGGGCTG ATCGTGGTCA ATACCAACCC GCTGTACACC GAGCGCGAGA TGCGCCACCA GTTCAAGGAC AGTGGCGCGC GTGCGCTGGT GTACCTGAAC ATGTTCGGCA AGCGCGTGCA GGAGGTGCTG CCCGATACCG GTATCGAATA CCTGATCGAG GCAAAGATGG GTGACCTGCT GCCGGCCGCC AAGGGCTGGC TGGTCAACAC CGTGGTCGAC AAGTTGAAGA AGATGGTGCC GGCCTACCGG TTGCCCCAGG CGGTGCCGTT CAAGCAGGTG CTGCGCGAGG GCCGCGGGCT GTCGCCCAAA CCGGTGTCGC TGAACCTCGA TGACATCGCG GTGCTGCAGT ACACCGGCGG CACCACCGGC CTGGCCAAGG GCGCCATGCT CACCCATGGC AACCTGGTGG CCAACATGCT GCAAGTGCTG GCCTGCTTCT CGCAGCACGG CCCCGATGGG CAGAAGCTGC TGAAGGACGG CCAGGAAGTG ATGATTGCGC CGCTGCCGCT GTACCACATC TATGCCTTCA CCGCGAACTG CATGTGCATG ATGGTCACCG GCAACCATAA TGTGCTGATT ACCAACCCGC GGGATATTCC CGGCTTCATC AAGGAGCTGG GCAAGTGGCG TTTCTCTGCC TTGCTGGGCC TCAATACCCT GTTTGTCGCA CTGATGGACC ACCCGGGATT CCGTCAGCTG GACTTCTCGG CGCTGAAGGT CACCAACTCT GGTGGCACAG CGCTGGTCAA AGCCACCGCC GAGCGCTGGG AAGACCTTAC CGGGTGCCGC ATCGTTGAAG GCTACGGCCT GACAGAAACC TCGCCGGTGG CCAGCACTAA CCCCTACGGC CAGCTGGCGC GTCTGGGTAC CGTGGGCATC CCCGTGGCGG GTACCGCGTT CAAGGTCATC GATGATGATG GCAACGAACT GCCGCTGGGC GAGCGGGGCG AGCTTTGCAT CAAAGGCCCG CAGGTCATGA AGGGGTACTG GCAGCAGCCC GAGGCAACGG CCCAGGCACT GGATGCAGAA GGCTGGTTCA AGACCGGTGA TATCGCGGTG ATCGACCCGG ACGGCTTCAC CCGAATTGTC GACCGCAAGA AGGACATGAT CATCGTCTCG GGCTTCAACG TGTACCCCAA CGAAATCGAG GATGTGGTGA TGGGGCATCC CAAGGTCGCC AACTGTGCGG CTATCGGCGT GCCGGACGAG CGTTCCGGCG AGGCGGTCAA GCTGTTCGTG GTGCCGCGCG AGGGGGGGCT GAGCGTTGAT GAGCTGAAGG CCTACTGCAA GGCCAACTTC ACCGGCTACA AAGTACCCAA GCACATCGTG CTGCGCGAAT CGTTGCCCAT GACGCCGGTG GGCAAGATTT TGCGGCGGGA GTTGCGCGAT ATAGCGTGA
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Protein sequence | MQADFWNDKR PAGVPSTIDI NAYASVVEVF ERSCKRFADR PAFSNLGVTL SYAELERHSA AFAAWLQQHT DLKPGERIAV QMPNVLQYPI AVFGAMRAGL IVVNTNPLYT EREMRHQFKD SGARALVYLN MFGKRVQEVL PDTGIEYLIE AKMGDLLPAA KGWLVNTVVD KLKKMVPAYR LPQAVPFKQV LREGRGLSPK PVSLNLDDIA VLQYTGGTTG LAKGAMLTHG NLVANMLQVL ACFSQHGPDG QKLLKDGQEV MIAPLPLYHI YAFTANCMCM MVTGNHNVLI TNPRDIPGFI KELGKWRFSA LLGLNTLFVA LMDHPGFRQL DFSALKVTNS GGTALVKATA ERWEDLTGCR IVEGYGLTET SPVASTNPYG QLARLGTVGI PVAGTAFKVI DDDGNELPLG ERGELCIKGP QVMKGYWQQP EATAQALDAE GWFKTGDIAV IDPDGFTRIV DRKKDMIIVS GFNVYPNEIE DVVMGHPKVA NCAAIGVPDE RSGEAVKLFV VPREGGLSVD ELKAYCKANF TGYKVPKHIV LRESLPMTPV GKILRRELRD IA
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