Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4549 |
Symbol | fadD |
ID | 1046084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5171260 |
End bp | 5172957 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147947 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | NP_746658 |
Protein GI | 26991233 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.835945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA ATTTTTGGAA GGATAAGTAC CCAGCCGGGA TTACGGCGGA AATCAATCCT GACGAATTCC CCAATATCCA GGCAGTACTC AAGCAATCCT GCCAACGCTT TGCCGACAAA CCGGCCTTTA GCAACCTGGG CAAGACTATC ACTTATGGCG AGTTGTATGC GTTGTCGGGG GCGTTTGCCG CCTGGCTGCA GCAGCATACC GACCTCAAGC CGGGTGACCG CATTGCCGTG CAACTGCCCA ATGTCCTGCA ATACCCGGTC GCGGTCTTCG GTGCCATGCG TGCCGGGCTG ATCGTGGTCA ACACCAACCC GCTGTACACC GCGCGGGAGA TGGAACACCA GTTCAACGAC TCGGGTGCCA AGGCCCTGGT GTGCCTGGCC AACATGGCCC ACCTGGCGGA AAAAGTGGTG CCCAAAACCC AGGTCAGGCA CGTTATCGTC ACTGAAGTTG CCGACCTGCT GCCACCACTC AAGCGCCTGC TGATCAACAG CGTGATCAAG TACGTGAAGA AGATGGTGCC GGCCTACAAC CTGCCGCAGG CCGTGCGTTT CAATGACGCC CTGGCGCTGG GCAAGGGCCA GCCCGTGACC GAAGCCAACC CGCAGGCCAA CGACGTGGCG GTGCTGCAGT ACACCGGCGG TACCACCGGT GTGGCCAAAG GCGCCATGCT GACCCACCGC AACCTGGTGG CCAACATGCT GCAGTGCCGT GCACTGATGG GCTCCAACCT GCACGAAGGC TGCGAAATCC TCATCACCCC GCTGCCGCTG TACCACATCT ATGCGTTTAC CTTCCATTGC ATGGCGATGA TGCTGATCGG CAACCACAAC GTGCTGATCA GCAACCCGCG TGACTTGCCG GCGATGGTCA AGGAACTGGG CAAGTGGAAG TTCAGCGGCT TTGTGGGCCT CAACACCCTG TTCGTTGCCC TGTGCAACAA CGAGGCGTTC CGAGCCCTGG ATTTCTCGGC GCTGAAAATC ACCCTGTCGG GCGGTATGGC CTTGCAGCTA AGCGTGGCCG AGCGCTGGAA GGCCGTTACC GGTTGCGCCA TCTGCGAAGG CTACGGCATG ACCGAAACCA GCCCGGTGGC GGCGGTGAAC CCCTCGGAAG CGAACCAGGT GGGCACCATC GGTATTCCGG TGCCGTCGAC CCTGTGCAAG GTCATCGACG ACGCCGGCAA TGAGTTGCCG CTTGGCGAAG TGGGCGAGCT GTGTGTCAAG GGCCCGCAGG TGATGAAGGG CTACTGGCAG CGTGAAGACG CCACGGCCGA GATTCTCGAC AGCGAAGGCT GGCTGAAGAC CGGCGACATC GCCGTGATCC AGGCGGACGG CTACATGCGC ATCGTCGACC GCAAGAAAGA CATGATCCTG GTCTCGGGCT TCAACGTATA CCCCAACGAG CTGGAAGACG TGTTGGCGGC CCTGCCGGGC GTGCTGCAGT GCGCAGCCAT CGGTGTGCCG GACGAGAAGT CGGGTGAAGT GATCAAGGTC TTCATCGTGG TCAAGCCGGG CATGACCGTG ACCAAGGAGC AGGTGATGGA GCACATGCGT GCCAACGTTA CCGGCTACAA GGTACCGCGC CACATCGAGT TCCGCGATTC GCTGCCGACC ACCAACGTGG GCAAGATCCT GCGCCGCGAA CTGCGTGATG AAGAGCTCAA GAAGCAAGGC TTGAAGAAGA TCGCCTGA
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Protein sequence | MIENFWKDKY PAGITAEINP DEFPNIQAVL KQSCQRFADK PAFSNLGKTI TYGELYALSG AFAAWLQQHT DLKPGDRIAV QLPNVLQYPV AVFGAMRAGL IVVNTNPLYT AREMEHQFND SGAKALVCLA NMAHLAEKVV PKTQVRHVIV TEVADLLPPL KRLLINSVIK YVKKMVPAYN LPQAVRFNDA LALGKGQPVT EANPQANDVA VLQYTGGTTG VAKGAMLTHR NLVANMLQCR ALMGSNLHEG CEILITPLPL YHIYAFTFHC MAMMLIGNHN VLISNPRDLP AMVKELGKWK FSGFVGLNTL FVALCNNEAF RALDFSALKI TLSGGMALQL SVAERWKAVT GCAICEGYGM TETSPVAAVN PSEANQVGTI GIPVPSTLCK VIDDAGNELP LGEVGELCVK GPQVMKGYWQ REDATAEILD SEGWLKTGDI AVIQADGYMR IVDRKKDMIL VSGFNVYPNE LEDVLAALPG VLQCAAIGVP DEKSGEVIKV FIVVKPGMTV TKEQVMEHMR ANVTGYKVPR HIEFRDSLPT TNVGKILRRE LRDEELKKQG LKKIA
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