Gene PP_4537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4537 
Symbol 
ID1042123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5153335 
End bp5154210 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content64% 
IMG OID637147935 
Productcarboxylate/amino acid/amine transporter 
Protein accessionNP_746646 
Protein GI26991221 
COG category 
COG ID 
TIGRFAM ID[TIGR00950] Carboxylate/Amino Acid/Amine Transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.778946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTATC TGATAATCGT CGCGCTGATC CAGGCGTTTT CCTTCAGCTT GATCGGCGAG 
TACCTGGCCG GGCACGTCGA CAGCTATTTC GCAGTGCTCG CCAGGGTGCT GCTGGCCGGC
CTGGTGTTCC TGCCGCTGAC CCGCTGGCGC CAGGTCGAGC CACGCTTCAT GCGTTCCATG
CTGCTGATTG GCGCGCTGCA GTACGGCATC ACCTATGTCT GCCTGTACCT GAGCTTCCGC
GTGCTCACCG TACCGGAGGT GCTGCTGTTC ACGATCCTGA CGCCGCTACA CGTGACCTTG
ATCGAAGATG CCCTGAACCG GCGCTTCAAC GCTTGGGCGC TAGTGGCCGC GCTGGTCGCC
GTGGCCGGTG CTGCCGTGAT CCGCTTCGAC AGCATCAGCG GCGAGTTTTT CATCGGCTTC
CTGCTGCTGC AACTGGCCAA CTTCACCTAC GCTGCCGGCC AGGTGCTGTA CCGTCACTTG
GTCGCTCGCC ACCCCAGCGA CCTGCCACAC TACGCCCGCT TCGGTTACTT CTACCTCGGT
GCGTTGCTGG TGGTGCTGCC GGCCTTCCTG CTGTTCGGCA ATACCCAGCA CTTGCCGAGC
ACTGACGTGC AATGGCTGGT GCTGTTGTTC CTGGGGCTGT GTCCGACGGC GCTGGGGCTG
TACTGGTGGA ACAAAGGTGC ATGCCTGGTT TCTGGCGGTA CGCTGGCGGT GATGAACAAC
CTGCATGTGC CGGTGGGGCT GCTGCTGAAC CTGTTGATCT GGAACCAGCA CGAGCCGTTG
GGGCGGCTGT TCATCGGCGG GGGGATCATC CTGGCGTCGG TGTGGCTGAG CCGCCTGGGT
GGGCGCGCAC AGGCGCCGCT GGCCGGCAAG GCCTGA
 
Protein sequence
MGYLIIVALI QAFSFSLIGE YLAGHVDSYF AVLARVLLAG LVFLPLTRWR QVEPRFMRSM 
LLIGALQYGI TYVCLYLSFR VLTVPEVLLF TILTPLHVTL IEDALNRRFN AWALVAALVA
VAGAAVIRFD SISGEFFIGF LLLQLANFTY AAGQVLYRHL VARHPSDLPH YARFGYFYLG
ALLVVLPAFL LFGNTQHLPS TDVQWLVLLF LGLCPTALGL YWWNKGACLV SGGTLAVMNN
LHVPVGLLLN LLIWNQHEPL GRLFIGGGII LASVWLSRLG GRAQAPLAGK A