Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4537 |
Symbol | |
ID | 1042123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5153335 |
End bp | 5154210 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147935 |
Product | carboxylate/amino acid/amine transporter |
Protein accession | NP_746646 |
Protein GI | 26991221 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.778946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCTATC TGATAATCGT CGCGCTGATC CAGGCGTTTT CCTTCAGCTT GATCGGCGAG TACCTGGCCG GGCACGTCGA CAGCTATTTC GCAGTGCTCG CCAGGGTGCT GCTGGCCGGC CTGGTGTTCC TGCCGCTGAC CCGCTGGCGC CAGGTCGAGC CACGCTTCAT GCGTTCCATG CTGCTGATTG GCGCGCTGCA GTACGGCATC ACCTATGTCT GCCTGTACCT GAGCTTCCGC GTGCTCACCG TACCGGAGGT GCTGCTGTTC ACGATCCTGA CGCCGCTACA CGTGACCTTG ATCGAAGATG CCCTGAACCG GCGCTTCAAC GCTTGGGCGC TAGTGGCCGC GCTGGTCGCC GTGGCCGGTG CTGCCGTGAT CCGCTTCGAC AGCATCAGCG GCGAGTTTTT CATCGGCTTC CTGCTGCTGC AACTGGCCAA CTTCACCTAC GCTGCCGGCC AGGTGCTGTA CCGTCACTTG GTCGCTCGCC ACCCCAGCGA CCTGCCACAC TACGCCCGCT TCGGTTACTT CTACCTCGGT GCGTTGCTGG TGGTGCTGCC GGCCTTCCTG CTGTTCGGCA ATACCCAGCA CTTGCCGAGC ACTGACGTGC AATGGCTGGT GCTGTTGTTC CTGGGGCTGT GTCCGACGGC GCTGGGGCTG TACTGGTGGA ACAAAGGTGC ATGCCTGGTT TCTGGCGGTA CGCTGGCGGT GATGAACAAC CTGCATGTGC CGGTGGGGCT GCTGCTGAAC CTGTTGATCT GGAACCAGCA CGAGCCGTTG GGGCGGCTGT TCATCGGCGG GGGGATCATC CTGGCGTCGG TGTGGCTGAG CCGCCTGGGT GGGCGCGCAC AGGCGCCGCT GGCCGGCAAG GCCTGA
|
Protein sequence | MGYLIIVALI QAFSFSLIGE YLAGHVDSYF AVLARVLLAG LVFLPLTRWR QVEPRFMRSM LLIGALQYGI TYVCLYLSFR VLTVPEVLLF TILTPLHVTL IEDALNRRFN AWALVAALVA VAGAAVIRFD SISGEFFIGF LLLQLANFTY AAGQVLYRHL VARHPSDLPH YARFGYFYLG ALLVVLPAFL LFGNTQHLPS TDVQWLVLLF LGLCPTALGL YWWNKGACLV SGGTLAVMNN LHVPVGLLLN LLIWNQHEPL GRLFIGGGII LASVWLSRLG GRAQAPLAGK A
|
| |