| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4533 |
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| Symbol | |
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| ID | 1046261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5146894 |
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| End bp | 5148195 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147932 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | NP_746643 |
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| Protein GI | 26991218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCC AACGAATCTG GCGTGACTCC CTCGACCTGT GGGGCACCCT CGACCAACAT
CCCATGCTGC ACGCCGCCAT CGGTCTGGCG GTACTGCTGC TCATCTCCCT GGTAGTCGGC
CGCCTGGCGC GCTTCCTGAT ACTGCACGGC GCGCGCCTGC TGGCCCGCCA GCCTGCACTG
AAGTGGCTGG ACGACCTGCG CCACAACAAG GTGTTCCACC GCCTGGCACA AACGACCCCG
TCCCTGGTGC TGCAGTTCGG CCTGAAGCTG GTGCCTGAGC TGTCCGACAC CGCTCAGCAC
TTCCTCGGCA ATGTCGCCCT GGCCTTTACC CTGTTGTTCA TGACCATGGC GCTGTCATGC
CTGCTGGATG CCCTGCTCGA CATCTATGCC CGCACCGAAC ACGCCCGCAC CCGCTCGATC
AAGGGCTACG TGCAACTGGC CAAGATGATG TTGTGGATCT TCGCCTCGAT CATCATCGTC
GCCACCCTGA TCGACCGCTC GCCGCTGTTG CTGCTGTCCG GTCTGGGTGC GATGTCGGCG
GTATTGCTGT TGGTGTACAA GGACACCCTG CTGTCATTCG TCGCCAGCGT GCAACTGACC
AGCAACGACA TGCTGCATGT CGGGGACTGG ATCGAAATGC CGCAGGTAGG CGCCGATGGC
GACGTGGTGG ACATCACCTT GCACACGGTG AAAGTACAGA ACTTCGACAA GACCATCGTG
TCCATCCCCA CCTGGCGCCT GATGAGCGAG TCATTCCGCA ATTACCGCGG CATGCAGCAG
TCCGGTGGCC GGCGCATCAA GCGCAGCCTG TTCATCGACG CCGCCGGCGT GCGCTTCCTC
ACCCGCGAAG AAGAACAGCG CCTGAGCCAG GTGCAGCTAC TGAGTGACTA CCTGGCGGGC
AAGCGCCAGG AACTGCAAAA CTGGAACGAG GCGCTGGGGC CGGTGGCGGA CCTGTCGGCC
AACCGCCGCA AGCTGACCAA CATCGGCACC TTCCGCGCGT TTGCCCTGGC CTATCTGAAG
AACCATCCCA ACGTGCACCC CAACATGACC TGCATGGTGC GGCAGATGCA GACCACCGCC
GAAGGCGTGC CGCTGGAGAT CTACTGCTTC ACCACCACCA CGGTGTGGGC GGATTACGAG
CGCATCCAGG GGGATATCTT CGACTACCTG CTGGCGGTGT TGCCGGAGTT CGGCTTGAGC
CTGTATCAGC AGCCGAGTGG CAATGACATG CGCGTGGGGT TGGCCGGGCG TACGGCGGCG
GAGCCGATGC CGCGACACCT TGAAGAAATG AGCGAGGCCT GA
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| Protein sequence | MDIQRIWRDS LDLWGTLDQH PMLHAAIGLA VLLLISLVVG RLARFLILHG ARLLARQPAL
KWLDDLRHNK VFHRLAQTTP SLVLQFGLKL VPELSDTAQH FLGNVALAFT LLFMTMALSC
LLDALLDIYA RTEHARTRSI KGYVQLAKMM LWIFASIIIV ATLIDRSPLL LLSGLGAMSA
VLLLVYKDTL LSFVASVQLT SNDMLHVGDW IEMPQVGADG DVVDITLHTV KVQNFDKTIV
SIPTWRLMSE SFRNYRGMQQ SGGRRIKRSL FIDAAGVRFL TREEEQRLSQ VQLLSDYLAG
KRQELQNWNE ALGPVADLSA NRRKLTNIGT FRAFALAYLK NHPNVHPNMT CMVRQMQTTA
EGVPLEIYCF TTTTVWADYE RIQGDIFDYL LAVLPEFGLS LYQQPSGNDM RVGLAGRTAA
EPMPRHLEEM SEA
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