Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4532 |
Symbol | |
ID | 1046264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5145429 |
End bp | 5146751 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147931 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | NP_746642 |
Protein GI | 26991217 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCTCCC AATTCGCCCT GCATGAACGC CTGCTTAAAG CCGTGGCCGA GCTTAAATTT GTCGAGCCAA CCCCGGTGCA GGCCGCGGCC ATCCCCCTGG CCCTGCAAGG GCGGGATCTG CGTGTGACTG CGCAGACCGG CAGCGGCAAG ACGGCGGCCT TCGTACTGCC ACTGCTCAAC CGTCTGGTCG ACCTCAGCGG TCCGCGTGTC GAGATTCGCG CGTTGATCCT GCTGCCGACC CGTGAACTGG CCCAGCAGAC CCTCAAGCAG GTGCAGCTGT TCTCGCAGTT CACCTACATC AAGTCGGGCC TGGTGACTGG CGGCGAAGAC TTCAAGGAAC AGGCCGCCAT GCTGCGCAAG GTGCCTGACG TGCTGATCGG CACCCCGGGT CGCCTGCTCG AGCAGCTCAA TGCCGGCAAC CTCGACCTGT CCCACGTGCA GGTCCTGATC CTGGACGAAG CCGACCGCAT GCTCGACATG GGCTTTGCCG AAGACATGGA GCGCCTGTGC AAAGAGTGCG AAAACCGCGA GCAGACCTTG CTGTTCTCGG CTACCACCGG TGGCGCGGCC CTGCGCGACA TCATCGGCAA GGTGCTGAAA GACCCTGAAC ACCTGATGCT CAACAGTGTC TCGCAACTGG CTGAAGGCAC CCGCCAGCAG ATCATTACCG CCGACCACGA CCAGCATAAA GAGCAGATCG CGCAGTGGTT GCTGGCCAAC GAAACCTTCG ACAAGGCGAT CATCTTCACC AACACCCGCG CCATGGCCGA CCGCATCTAC GGTCACCTGG TGGCCAAGGA CGTGAAGGCT TTCGTGCTGC ATGGCGAAAA GGACCAGAAG GACCGCAAGC TGGCCATCGA GCGCTTCAAG CAGGGCAGCT CCAAAGTGCT GGTGGCGACC GACGTGGCAG CCCGTGGCCT GGATATCGAC GGCCTGGACC TGGTGATCAA CTTCGACATG CCACGTAGCG GTGACGAGTA CGTACACCGT GTGGGCCGTA CCGGCCGTGC CGGTGGCGAA GGCCTGGCGA TCTCGTTGAT CACCCACAAC GACTGGAACC TGATGTCGAG CATCGAGCGC TACCTCAAGC AGCAGTTCGA GCGCCGGGTC ATCAAGGAAG TGAAGGGCAC CTACAACGGG CCGAAGAAGG TCAAGGCCTC GGGCAAGGCG GCCGGTAGCA AGAAGAAAAA GGTCGAGAAG AAGACCGGCG ACAAGAAAGC TGCCGCCAAG CGCAAGCCTA CTGCCAAGCC GAAAGCCAAT GCGCCTCTGG CCAGTGCAGA TGGCCTGGCA CCGCTGAAGA AGCGCAAGCC TGCTGCTGAA TAA
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Protein sequence | MFSQFALHER LLKAVAELKF VEPTPVQAAA IPLALQGRDL RVTAQTGSGK TAAFVLPLLN RLVDLSGPRV EIRALILLPT RELAQQTLKQ VQLFSQFTYI KSGLVTGGED FKEQAAMLRK VPDVLIGTPG RLLEQLNAGN LDLSHVQVLI LDEADRMLDM GFAEDMERLC KECENREQTL LFSATTGGAA LRDIIGKVLK DPEHLMLNSV SQLAEGTRQQ IITADHDQHK EQIAQWLLAN ETFDKAIIFT NTRAMADRIY GHLVAKDVKA FVLHGEKDQK DRKLAIERFK QGSSKVLVAT DVAARGLDID GLDLVINFDM PRSGDEYVHR VGRTGRAGGE GLAISLITHN DWNLMSSIER YLKQQFERRV IKEVKGTYNG PKKVKASGKA AGSKKKKVEK KTGDKKAAAK RKPTAKPKAN APLASADGLA PLKKRKPAAE
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