Gene PP_4532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4532 
Symbol 
ID1046264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5145429 
End bp5146751 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID637147931 
ProductDEAD-box ATP dependent DNA helicase 
Protein accessionNP_746642 
Protein GI26991217 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCCC AATTCGCCCT GCATGAACGC CTGCTTAAAG CCGTGGCCGA GCTTAAATTT 
GTCGAGCCAA CCCCGGTGCA GGCCGCGGCC ATCCCCCTGG CCCTGCAAGG GCGGGATCTG
CGTGTGACTG CGCAGACCGG CAGCGGCAAG ACGGCGGCCT TCGTACTGCC ACTGCTCAAC
CGTCTGGTCG ACCTCAGCGG TCCGCGTGTC GAGATTCGCG CGTTGATCCT GCTGCCGACC
CGTGAACTGG CCCAGCAGAC CCTCAAGCAG GTGCAGCTGT TCTCGCAGTT CACCTACATC
AAGTCGGGCC TGGTGACTGG CGGCGAAGAC TTCAAGGAAC AGGCCGCCAT GCTGCGCAAG
GTGCCTGACG TGCTGATCGG CACCCCGGGT CGCCTGCTCG AGCAGCTCAA TGCCGGCAAC
CTCGACCTGT CCCACGTGCA GGTCCTGATC CTGGACGAAG CCGACCGCAT GCTCGACATG
GGCTTTGCCG AAGACATGGA GCGCCTGTGC AAAGAGTGCG AAAACCGCGA GCAGACCTTG
CTGTTCTCGG CTACCACCGG TGGCGCGGCC CTGCGCGACA TCATCGGCAA GGTGCTGAAA
GACCCTGAAC ACCTGATGCT CAACAGTGTC TCGCAACTGG CTGAAGGCAC CCGCCAGCAG
ATCATTACCG CCGACCACGA CCAGCATAAA GAGCAGATCG CGCAGTGGTT GCTGGCCAAC
GAAACCTTCG ACAAGGCGAT CATCTTCACC AACACCCGCG CCATGGCCGA CCGCATCTAC
GGTCACCTGG TGGCCAAGGA CGTGAAGGCT TTCGTGCTGC ATGGCGAAAA GGACCAGAAG
GACCGCAAGC TGGCCATCGA GCGCTTCAAG CAGGGCAGCT CCAAAGTGCT GGTGGCGACC
GACGTGGCAG CCCGTGGCCT GGATATCGAC GGCCTGGACC TGGTGATCAA CTTCGACATG
CCACGTAGCG GTGACGAGTA CGTACACCGT GTGGGCCGTA CCGGCCGTGC CGGTGGCGAA
GGCCTGGCGA TCTCGTTGAT CACCCACAAC GACTGGAACC TGATGTCGAG CATCGAGCGC
TACCTCAAGC AGCAGTTCGA GCGCCGGGTC ATCAAGGAAG TGAAGGGCAC CTACAACGGG
CCGAAGAAGG TCAAGGCCTC GGGCAAGGCG GCCGGTAGCA AGAAGAAAAA GGTCGAGAAG
AAGACCGGCG ACAAGAAAGC TGCCGCCAAG CGCAAGCCTA CTGCCAAGCC GAAAGCCAAT
GCGCCTCTGG CCAGTGCAGA TGGCCTGGCA CCGCTGAAGA AGCGCAAGCC TGCTGCTGAA
TAA
 
Protein sequence
MFSQFALHER LLKAVAELKF VEPTPVQAAA IPLALQGRDL RVTAQTGSGK TAAFVLPLLN 
RLVDLSGPRV EIRALILLPT RELAQQTLKQ VQLFSQFTYI KSGLVTGGED FKEQAAMLRK
VPDVLIGTPG RLLEQLNAGN LDLSHVQVLI LDEADRMLDM GFAEDMERLC KECENREQTL
LFSATTGGAA LRDIIGKVLK DPEHLMLNSV SQLAEGTRQQ IITADHDQHK EQIAQWLLAN
ETFDKAIIFT NTRAMADRIY GHLVAKDVKA FVLHGEKDQK DRKLAIERFK QGSSKVLVAT
DVAARGLDID GLDLVINFDM PRSGDEYVHR VGRTGRAGGE GLAISLITHN DWNLMSSIER
YLKQQFERRV IKEVKGTYNG PKKVKASGKA AGSKKKKVEK KTGDKKAAAK RKPTAKPKAN
APLASADGLA PLKKRKPAAE