Gene PP_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4497 
Symbol 
ID1043473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5112675 
End bp5113508 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content63% 
IMG OID637147896 
Producthypothetical protein 
Protein accessionNP_746607 
Protein GI26991182 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCAGAA TGAACCTTTC GCCGCCATTC ACGTGCGGCT TCGCCCGGCG CCAGTTGAAG 
AACCCAATGA ACCTGAATGA ACCCCGCGAC CTGGCGTCGC TGATCGAAGC CTTCTTGCTC
GCTTCGGGCA AGCCGCAATC CCTGGAGCGC CTGTACGAGC TGTTCGAGGA AGCCGAGCGC
CCCGAGCCCA AGGTGTTCAG GCTGGCCCTG GAGGTGCTGG GCAAGTCGTG CGATGGGCGT
GCGTTCGAGC TCAAGGAGGT GGCCAGCGGC TATCGCCTGC AGATTCGCGA GGATTATGCC
CCTTGGGTCG GGCGCCTGTG GGAAGAGCGC CCGCAGCGCT ATTCGCGAGC GCTGCTTGAG
ACACTGGCCC TGATTGCCTA CCGCCAGCCG ATCACCCGTG GTGAAATCGA GGACGTGCGG
GGCGTTGCGG TGAACAGCAA TATCATCAAG ACCATGATGG AGCGCGAGTG GATTCGCGTG
GTCGGCTACC GCGAAGTGCC CGGGCGGCCG GCGATGTTCG CCACCACCAA GGCGTTTCTC
GATCATTTCA ACCTCAAGAG CCTTGAGGAC CTGCCGGCCT TGGCCGAGCT GCGCGAAATG
GAACCAGCGC CGCAACTTGA CCCGGATGAT GCGCCGGTGC CTGCGCACCT GCAGGCGTTG
GCGGATGCCA GCCTTGGGGA CGAGGAGGTT GGTGAGCCGA AAGAGGAGAC CAGCTTCCGT
AGCCTGTTGG TGGAGCTGGA TGCCATGGAA GACGGTTTGA AAACCGATTT TGATGATCTG
CGGGGAGAGG AGCCTGAGCC TCCGGTGGAG GAGGAGATCA AGGCTCAGCC CTGA
 
Protein sequence
MCRMNLSPPF TCGFARRQLK NPMNLNEPRD LASLIEAFLL ASGKPQSLER LYELFEEAER 
PEPKVFRLAL EVLGKSCDGR AFELKEVASG YRLQIREDYA PWVGRLWEER PQRYSRALLE
TLALIAYRQP ITRGEIEDVR GVAVNSNIIK TMMEREWIRV VGYREVPGRP AMFATTKAFL
DHFNLKSLED LPALAELREM EPAPQLDPDD APVPAHLQAL ADASLGDEEV GEPKEETSFR
SLLVELDAME DGLKTDFDDL RGEEPEPPVE EEIKAQP