Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4497 |
Symbol | |
ID | 1043473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5112675 |
End bp | 5113508 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147896 |
Product | hypothetical protein |
Protein accession | NP_746607 |
Protein GI | 26991182 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCAGAA TGAACCTTTC GCCGCCATTC ACGTGCGGCT TCGCCCGGCG CCAGTTGAAG AACCCAATGA ACCTGAATGA ACCCCGCGAC CTGGCGTCGC TGATCGAAGC CTTCTTGCTC GCTTCGGGCA AGCCGCAATC CCTGGAGCGC CTGTACGAGC TGTTCGAGGA AGCCGAGCGC CCCGAGCCCA AGGTGTTCAG GCTGGCCCTG GAGGTGCTGG GCAAGTCGTG CGATGGGCGT GCGTTCGAGC TCAAGGAGGT GGCCAGCGGC TATCGCCTGC AGATTCGCGA GGATTATGCC CCTTGGGTCG GGCGCCTGTG GGAAGAGCGC CCGCAGCGCT ATTCGCGAGC GCTGCTTGAG ACACTGGCCC TGATTGCCTA CCGCCAGCCG ATCACCCGTG GTGAAATCGA GGACGTGCGG GGCGTTGCGG TGAACAGCAA TATCATCAAG ACCATGATGG AGCGCGAGTG GATTCGCGTG GTCGGCTACC GCGAAGTGCC CGGGCGGCCG GCGATGTTCG CCACCACCAA GGCGTTTCTC GATCATTTCA ACCTCAAGAG CCTTGAGGAC CTGCCGGCCT TGGCCGAGCT GCGCGAAATG GAACCAGCGC CGCAACTTGA CCCGGATGAT GCGCCGGTGC CTGCGCACCT GCAGGCGTTG GCGGATGCCA GCCTTGGGGA CGAGGAGGTT GGTGAGCCGA AAGAGGAGAC CAGCTTCCGT AGCCTGTTGG TGGAGCTGGA TGCCATGGAA GACGGTTTGA AAACCGATTT TGATGATCTG CGGGGAGAGG AGCCTGAGCC TCCGGTGGAG GAGGAGATCA AGGCTCAGCC CTGA
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Protein sequence | MCRMNLSPPF TCGFARRQLK NPMNLNEPRD LASLIEAFLL ASGKPQSLER LYELFEEAER PEPKVFRLAL EVLGKSCDGR AFELKEVASG YRLQIREDYA PWVGRLWEER PQRYSRALLE TLALIAYRQP ITRGEIEDVR GVAVNSNIIK TMMEREWIRV VGYREVPGRP AMFATTKAFL DHFNLKSLED LPALAELREM EPAPQLDPDD APVPAHLQAL ADASLGDEEV GEPKEETSFR SLLVELDAME DGLKTDFDDL RGEEPEPPVE EEIKAQP
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