Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4494 |
Symbol | |
ID | 1046259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5108262 |
End bp | 5109146 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637147894 |
Product | LysR family transcriptional regulator |
Protein accession | NP_746605 |
Protein GI | 26991180 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTACC GCCACCTGAC CCCATCCATG TCACTGCTGC TGGCTTTCGA GGCCGCCGCC CGGCATGAAA GCTACACCCG CGCCGCCGCC GAACTGTCGC TGACCCAAAG CGCGGTCAGC CGCCAGGTAC AGGCCCTGGA GCAGCAGTTG GGCCTGACCC TGTTCCGCCG CGAGGGGCGC CAGGTACAGC TGACCGATGT CGGCCGCCTG TACCAGCGCG AGCTGAGCGA GGCACTGGGG CGCATCCGCA GCGCCACCTT GCAGGCACTG GCCTATCAAT CGGGAGTAGG CACGTTGCGC CTGGCCACCC TGCCAACCTT CGGTTCGAAA TGGCTGTTGC CGAGGCTGCA TGCGTTCTAC AGCGCTCACC CGGGCATGCT GGTGCACATT CATTCACGCA TTGAAACCAT CAACTTCGAC ACCAGCGAAA TCGATGCCGC CATCGGCGTG GCCAGCCACG ACTTGCCGGG TCTTGTCTGC CATCGCCTGC ATGCCGAGGA GCTGGTGGTG ATCTTGCCGC CGGAGGCTGG CGTCGGCAGC CAAGGCTGGA GCCCGGCCAG GATCAGCGAA GAGGTGCTGC TGAATGTGGC CAACAACCCG CATGCGTGGG GCGAGTGGTT TTCCCATCAT GGCCTGCCGC ACCGGGCGAT GCGGCTGGGG CCGAGCTTCG AGCTGACCTC GCACCTGATC CAGGCGGTAC GTGCCGGGAT CGGGATCGGG CTGGTGCCGC GCATATTGGT GGAGGAGGAA CTGGCCAAGG GAGAGCTGTA CAGCCCGGGG GTGGCGTTTG CCAGCCAGCG CAGTTATTAC CTGATCTACC CGCCGAGGAA TGAGGCACTG CCGTCGCTGC GGGCATTCAG GGGGTGGTTG CTGGAGCAGA TCTGA
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Protein sequence | MNYRHLTPSM SLLLAFEAAA RHESYTRAAA ELSLTQSAVS RQVQALEQQL GLTLFRREGR QVQLTDVGRL YQRELSEALG RIRSATLQAL AYQSGVGTLR LATLPTFGSK WLLPRLHAFY SAHPGMLVHI HSRIETINFD TSEIDAAIGV ASHDLPGLVC HRLHAEELVV ILPPEAGVGS QGWSPARISE EVLLNVANNP HAWGEWFSHH GLPHRAMRLG PSFELTSHLI QAVRAGIGIG LVPRILVEEE LAKGELYSPG VAFASQRSYY LIYPPRNEAL PSLRAFRGWL LEQI
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