| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4487 |
|---|
| Symbol | acsA |
|---|
| ID | 1042436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5097299 |
|---|
| End bp | 5099260 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637147887 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | NP_746598 |
|---|
| Protein GI | 26991173 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGG CTCCACTGTA TCCCGTTCGT CCCGAGGTTG CGGCCACTAC CCTGACCGAC
GAGGCCACCT ACAAGGCCAT GTACCAGCAA TCGGTGATCA ACCCGGACGG CTTCTGGCGC
GAGCAGGCCC AGCGTATCGA CTGGATCAAG CCGTTCACCA AGGTCAAGCA GACCTCCTTC
GACGACCACC ATGTCGATAT CAAATGGTTC GCCGACGGCA CTCTGAACGT TTCCTCCAAC
TGCCTGGACC GCCACCTTGA AGAGCGCGGT GACCAGTTGG CCATCATCTG GGAAGGTGAC
GACCCTTCCG AGCACCGCAA CATCACTTAC CGCGAGTTGC ACGAGCAGGT CTGCAAGTTC
GCCAACGCCC TGCGTGGCCA GGATGTGCAC CGCGGTGACG TGGTCACCAT CTATATGCCG
ATGATCCCCG AAGCGGTGGT CGCCATGCTG GCCTGTGCAC GCATTGGTGC GATTCACTCG
GTGGTGTTCG GTGGCTTCTC GCCCGAGGCG CTGGCTGGCC GTATCATCGA CTGCAAATCC
AAGGTGGTGA TCACTGCCGA CGAAGGCGTG CGTGGTGGCC GCCGTACCCC GCTCAAGGCC
AACGTCGACC TGGCGCTGAC CAACCCTGAA ACCAGCAGCG TGCAGAAAAT CATCGTGTGC
AAGCGCACCG GTGGCGACAT TGCCTGGCAC CAGCACCGCG ACATCTGGTA CGAAGACCTG
ATGAAAGTGG CCTCCAGCCA CTGCGCCCCC AAAGAAATGG GTGCTGAAGA GGCGCTGTTC
ATCCTTTATA CCTCCGGCTC CACCGGCAAG CCGAAGGGCG TGCTGCACAC CACAGGCGGT
TACCTGGTTT ACGCCGCGCT GACCCATGAA CGGGTGTTCG ATTACCGTCC GGGCGAGGTG
TACTGGTGCA CCGCCGACGT CGGTTGGGTC ACAGGCCACA GCTATATCGT CTACGGCCCG
CTGGCCAACG GCGCCACCAC CTTGCTGTTC GAAGGCGTGC CCAACTACCC GGACATTACC
CGCGTATCGA AGATCGTCGA CAAGCACAAG GTCAACATCC TCTACACAGC GCCAACTGCC
ATTCGCGCCA TGATGGCCGA AGGGCAGGCA GCTGTTGAAG GCGCCGACGG TTCCAGCCTG
CGTCTGCTGG GGTCGGTGGG TGAGCCGATC AACCCTGAGG CCTGGAACTG GTACTACAAG
ACCGTCGGCA AGGAGCGTTG CCCGATCGTC GACACCTGGT GGCAGACCGA GACCGGCGGC
ATTCTGATCA GCCCGCTGCC TGGTGCCACC GGCCTCAAGC CGGGTTCGGC AACCCGCCCG
TTCTTCGGTG TGGTGCCTGC CCTGGTCGAT AACCTGGGCA ACCTGATCGA CGGTGCTGCC
GAAGGCAACC TGGTAATCCT CGACTCCTGG CCGGGTCAGT CGCGTTCGCT GTACGGCGAC
CATGACCGCT TCGTCGACAC CTACTTCAAG ACCTTCCGTG GCATGTACTT CACTGGCGAC
GGTGCGCGCC GCGACGAGGA CGGTTACTAC TGGATCACCG GCCGTGTGGA TGACGTGCTC
AACGTGTCCG GCCACCGCAT GGGCACTGCC GAAATCGAAA GCGCCATGGT CGCGCACTCG
AAGGTTGCCG AGGCTGCAGT GGTTGGCGTG CCGCATGACA TCAAAGGGCA GGGCATTTAT
GTGTATGTCA CCCTCAATGC CGGCATCGAG GCCAGCGAGC AATTGCGCCT GGAGCTGAAG
AACTGGGTGC GCAAGGAGAT CGGCCCGATT GCTTCGCCGG ATGTGATCCA GTGGGCGCCG
GGGCTGCCGA AGACCCGCTC GGGCAAGATC ATGCGCCGCA TCCTGCGCAA GATCGCCACC
GGTGAGTACG ACGCCCTGGG CGATATCTCG ACCTTGGCTG ACCCGGGTGT GGTACAGCAC
CTGATCGATA CCCACAAGGC GATGAACCTG GCTTCGGCGT AA
|
|---|
| Protein sequence | MSAAPLYPVR PEVAATTLTD EATYKAMYQQ SVINPDGFWR EQAQRIDWIK PFTKVKQTSF
DDHHVDIKWF ADGTLNVSSN CLDRHLEERG DQLAIIWEGD DPSEHRNITY RELHEQVCKF
ANALRGQDVH RGDVVTIYMP MIPEAVVAML ACARIGAIHS VVFGGFSPEA LAGRIIDCKS
KVVITADEGV RGGRRTPLKA NVDLALTNPE TSSVQKIIVC KRTGGDIAWH QHRDIWYEDL
MKVASSHCAP KEMGAEEALF ILYTSGSTGK PKGVLHTTGG YLVYAALTHE RVFDYRPGEV
YWCTADVGWV TGHSYIVYGP LANGATTLLF EGVPNYPDIT RVSKIVDKHK VNILYTAPTA
IRAMMAEGQA AVEGADGSSL RLLGSVGEPI NPEAWNWYYK TVGKERCPIV DTWWQTETGG
ILISPLPGAT GLKPGSATRP FFGVVPALVD NLGNLIDGAA EGNLVILDSW PGQSRSLYGD
HDRFVDTYFK TFRGMYFTGD GARRDEDGYY WITGRVDDVL NVSGHRMGTA EIESAMVAHS
KVAEAAVVGV PHDIKGQGIY VYVTLNAGIE ASEQLRLELK NWVRKEIGPI ASPDVIQWAP
GLPKTRSGKI MRRILRKIAT GEYDALGDIS TLADPGVVQH LIDTHKAMNL ASA
|
|---|
| |