Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4484 |
Symbol | |
ID | 1043572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5094505 |
End bp | 5095203 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147884 |
Product | polar amino acid ABC transporter inner membrane subunit |
Protein accession | NP_746595 |
Protein GI | 26991170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.784127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTCG ACTACAACGT CGTGTGGGAA GCGCTGCCGA TGTACTTCGG CGGCCTGCTG ACCACCCTGA AACTGCTGGC GATTTCGCTT TTCTTCGGCC TGTTGGCAGC CATTCCGCTG GGCCTGATGC GGGTATCCAG GCAGCCGGTG GTCAACCTTG CTGCATGGCT GTACACCTAC GTCATCCGTG GCACGCCGAT GCTGGTGCAG CTGTTCCTGA TCTACTACGG CCTGGCCCAG TTCGAGGCAG TGCGCGAGAG TATCTTCTGG CCGCTGCTGT CCAGCGCTAC CTTCTGCGCC TGCCTGGCGT TCGGCATCAA TACCAGTGCC TACACCGCCG AAATCATTGC CGGCAGCCTC AAGGCGACGC CGCATGGCGA GATCGAAGCT GCCAAGGCCA TGGGAATGTC GCGCATGAAA ATGTACCGCC GCATCCTGCT GCCTTCGGCA CTGCGTCGGG CACTGCCGCA GTACAGCAAT GAAGTGATCA TGATGCTGCA GACCACCAGC CTGGCGTCGA TCGTCACCCT GATCGACATC ACCGGTGCTG CGCGCACGGT CAATGCCCAG TACTACCTGC CTTTCGAGGC CTATATCACG GCGGGCGTGT TCTACCTGTG CCTGACCTTC ATCCTGGTGC GCCTGTTCAA GATGGCCGAA CGCCGCTGGC TCGGCTACCT GGCGCCGCGC AAGCACTGA
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Protein sequence | MIFDYNVVWE ALPMYFGGLL TTLKLLAISL FFGLLAAIPL GLMRVSRQPV VNLAAWLYTY VIRGTPMLVQ LFLIYYGLAQ FEAVRESIFW PLLSSATFCA CLAFGINTSA YTAEIIAGSL KATPHGEIEA AKAMGMSRMK MYRRILLPSA LRRALPQYSN EVIMMLQTTS LASIVTLIDI TGAARTVNAQ YYLPFEAYIT AGVFYLCLTF ILVRLFKMAE RRWLGYLAPR KH
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