Gene PP_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4481 
SymbolargD 
ID1041851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5091082 
End bp5092302 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID637147881 
Productbifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein 
Protein accessionNP_746592 
Protein GI26991167 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.593317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG AGCAAGCCCC GGTGCAACGT GCCGATTTCG ACCAGGTGAT GGTCCCCAAC 
TATTCTCCGG CGGCCTTCAT TCCTGTGCGA GGCGAGGGTT CCCGTGTCTG GGACCAGTCG
GGTCGCGAGC TGATCGACTT TGCCGGCGGC ATCGCGGTCA ATGCCCTGGG CCATTGCCAC
CCGGCACTGG TCAAGGCCCT GACTGAACAG GCCAACACCC TCTGGCACGT CTCCAACGTG
TTCACCAACG AGCCGGCCCT GCGCCTGGCC CACAAGCTGG TGGACGCCAC CTTTGCCGAC
CGCGCGTTTT TCTGCAACTC CGGCGCCGAG TCCAACGAGG CCGCTTTCAA GCTGGCCCGT
CGTGTGGCGC ATGACCGCTT CGGTCCGCAA AAGCACGAAA TCATCGCCAC CGTGAACAGC
TTCCACGGTC GCACCCTGTT TACCGTCAGC GTGGGTGGCC AGCCGAAGTA CTCCGATGGC
TTTGGCCCGA AGATCACCGG TATCAGCCAT GTGCCGTACA ACGACCTGGA AGCGTTGAAG
GCACAGATTT CCGACAAGAC CTGTGCCGTG GTGATCGAGC CGATCCAGGG CGAGAGCGGC
GTGGTGCCGG CCGACAAGGC CTACCTGGAA GGCGCGCGCA AGCTGTGTGA CGAGCACAAC
GCTCTGCTGA TCTTCGACGA AGTGCAGACG GGCGTGGGCC GTACCGGCTC GCTGTATGCC
TACCAGCACT ACGGCGTGAT CCCGGACATT CTGACCAGTG CCAAGAGCCT GGGCGGCGGT
TTCCCGATTG GCGCCATGCT GACCACCACC GAGCTGGCCA AGCACCTGGC CGTTGGCACC
CACGGCACCA CCTATGGCGG CAACCCGCTG GGTTGCGCCG TTGCCTGCGC GGTGCTGGAC
GTGGTCAACA CCCCGGAAAC CCTGGCCGGT ATCAAGGCTA AGCACGAGCG CTTCAAAACC
CGCCTGGAAC AGATCGGCCA GCAGTACAAC CTGTTCAGCC AGGTGCGTGG TGTCGGCTTG
CTGCTGGGCT GTGTCTTGAC CGAGGCCTGG AAAGGCAAGG CCAAGGACGT GCTCAATGCT
GCCGAGAAAG AAGGCGTGAT GGTGCTGCAG GCCGGCCCGG ACGTGGTCCG CTTCGCGCCA
AGCCTGGTGG TTGAAGACGC CGACATCGAC GAAGGCCTGG ACCGCTTCGA ACGCGCTGTG
GCCACACTGA CCAAAGGCTG A
 
Protein sequence
MSVEQAPVQR ADFDQVMVPN YSPAAFIPVR GEGSRVWDQS GRELIDFAGG IAVNALGHCH 
PALVKALTEQ ANTLWHVSNV FTNEPALRLA HKLVDATFAD RAFFCNSGAE SNEAAFKLAR
RVAHDRFGPQ KHEIIATVNS FHGRTLFTVS VGGQPKYSDG FGPKITGISH VPYNDLEALK
AQISDKTCAV VIEPIQGESG VVPADKAYLE GARKLCDEHN ALLIFDEVQT GVGRTGSLYA
YQHYGVIPDI LTSAKSLGGG FPIGAMLTTT ELAKHLAVGT HGTTYGGNPL GCAVACAVLD
VVNTPETLAG IKAKHERFKT RLEQIGQQYN LFSQVRGVGL LLGCVLTEAW KGKAKDVLNA
AEKEGVMVLQ AGPDVVRFAP SLVVEDADID EGLDRFERAV ATLTKG