| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4478 |
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| Symbol | astD |
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| ID | 1043982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5087344 |
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| End bp | 5088807 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147878 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | NP_746589 |
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| Protein GI | 26991164 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.974998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.256307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC ATTACATCGC AGGCAATTGG CAGGCCGGCC AGGGCGAAAC CCTGCAGTCG
CTCAACCCGG TGACCCAGGC CGTGATCTGG CAAGGGCAGG GCGCTGACGC CAGCCAGGTC
GACGCCGCCG TGCAGGCCGC GCGGCAGGCC TTTCCGGCCT GGGCGCAATT GAGCCTGGAG
GCACGTATCG ATGTGCTGGA GAAGTTTGCC GCGCAGCTGA AAGTGCATGC CGAGGCCATG
GCCCAGTGCA TTGGCGAGGA AACCGGGAAG CCGCTGTGGG AATCTGCGAC TGAAGTCACC
AGCATGATCA ACAAGGTGGC GATTTCGGTA CAGAGCTACC GCGAGCGCAC CGGCGAAAAG
AGTGGTCCTC TGGCCGATGC CACGGCTGTT CTGCGGCACA AGCCTCACGG CGTCGTGGCG
GTGTTCGGCC CTTACAACTT CCCCGGGCAC CTGCCCAATG GCCATATCGT GCCGGCGCTG
CTGGCAGGCA ACTGCGTGGT GTTCAAGCCC AGCGAGCTGA CCCCCAAGGT CGCTGAGCTT
ACCGTCAACT GCTGGATTGC TGCCGGCCTG CCGGCGGGTG TGCTGAACCT GGTGCAGGGC
GCACGCGAAA CCGGTGTGGC GCTGGCCGCC AACCCAGGTA TCGATGGCCT GTTCTTCACC
GGCTCCAGCC GCACCGGCAA CCTGTTGCAT CAACAGTTCG CAGGCCGCCC AGACAAGATT
CTGGCCCTGG AAATGGGGGG TAACAACCCG CTCGTGGTGG ACGAGGTCAA GGACCTCGAC
GCGGCGGTGT ATACCATTAT CCAGTCGGCG TTCATTTCCG CCGGCCAACG CTGCACTTGC
GCGCGGCGCC TGCTGGTGCC GCAAGGCGCC TGGGGCGATG CACTGATCGC GCGCCTGGTC
GAGGTGTGCA AAACCATCAC GGTGGGGGCG TTCGATGAAC AGCCGGCGCC TTTCATGGGC
TCGGTGATTT CGCTGCAGGC GGCTCGGGCG CTGCTAGCCG CCCAGGTTGA ACTGGCCGCC
AAAGGTGGCG TGAAACTGCT GGAAATGACT CAGCCGCAGG CCGATGCTGC ACTGCTGACC
CCGGGCATTG TCGATGTCAC TGCCGTGGCT GACCGCCCGG ACGAAGAGTT TTTCGGCCCG
CTGTTGCAGG TGATCCGCTA CGCCGACTTC GATGCCGCCA TCGATGAAGC CAATAACACC
CAGTATGGCC TGGCCGCCGG CTTATTGTCT GATTCGCGAG CCCGCTACCA GTACTTCTGG
CTGCGCAGTC GCGCAGGCAT CGTCAACTGG AACAAACAGC TGACAGGGGC TGCCAGCAGC
GCGCCGTTCG GTGGCGTGGG AGCCAGTGGC AACCATCGCG CCAGTGCCTA TTACGCAGCC
GACTACTGCG CTTACCCCGT GGCTTCGCTG GAGACCGCCA GCCTTGCCTT GCCGGCGACC
CTGACGCCGG GCGTCACCCT ATAA
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| Protein sequence | MTTHYIAGNW QAGQGETLQS LNPVTQAVIW QGQGADASQV DAAVQAARQA FPAWAQLSLE
ARIDVLEKFA AQLKVHAEAM AQCIGEETGK PLWESATEVT SMINKVAISV QSYRERTGEK
SGPLADATAV LRHKPHGVVA VFGPYNFPGH LPNGHIVPAL LAGNCVVFKP SELTPKVAEL
TVNCWIAAGL PAGVLNLVQG ARETGVALAA NPGIDGLFFT GSSRTGNLLH QQFAGRPDKI
LALEMGGNNP LVVDEVKDLD AAVYTIIQSA FISAGQRCTC ARRLLVPQGA WGDALIARLV
EVCKTITVGA FDEQPAPFMG SVISLQAARA LLAAQVELAA KGGVKLLEMT QPQADAALLT
PGIVDVTAVA DRPDEEFFGP LLQVIRYADF DAAIDEANNT QYGLAAGLLS DSRARYQYFW
LRSRAGIVNW NKQLTGAASS APFGGVGASG NHRASAYYAA DYCAYPVASL ETASLALPAT
LTPGVTL
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