Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4463 |
Symbol | |
ID | 1041877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5065767 |
End bp | 5066588 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637147856 |
Product | carbon-nitrogen hydrolase family protein |
Protein accession | NP_746574 |
Protein GI | 26991149 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00268504 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAGTTT CTCTTATCCA GGTGAATTCA GTACAGGACA AGGCGTTCAA TTTGGCCGAA GCTGATCGTC TCGCACGAGA GGCAATCGAT CGAGACGGCT CACGTCTTGT TGTATTTCCT GAACACTTTG ACTGGGCGGG TGGTACACCT GAACAAAAGA TCGCAGCTGG CGAGCCGCAT AGCGGGGGGC CGGCTTATGA AATGTGTAAA AAACTGGCAC AGGACTGCAA TGTCTACGTT CACACCGGTA GCTTCTACGA AAGCACGCCT GACGGTAGCC GCGTCTATAA CACCTCGGTC GTTTTTGATC CCAAAGGCAA CGAGCTGGGT CGCTACCGTA AAATCCACCT GTTCGACATC GTCACTCCTG ACGGTATGCG CTATGGCGAA TCCAGTGCAG TAGCGCCAGG TACAGAGGTA TCGGTGGTCG ATATTGAAGG CCTTAAGTAT GGCTTTGCGA TCTGCTACGA CATTCGCTTC CCGGAGCTTT TCCAAAAGCT GGTTGCGTTG GGTGCTGATG TAATTGTACT GCCGGCGGCA TTTACCCTTC AAACTGGTAA AGATCATTGG GATGTACTCT GCCGCGCTCG GGCAATTGAA ACGCAGTGCT ATTTCCTTGC TCCAGGTCAA ACTGGGCCAT TCGAACAGTC CGGTGAGACT CGCTATTCCT ACGGTCACTC GCTGGTTTGT GATCCATGGG GCCACATTAT CGCCAAGGCG TCGGATGGTG TCGGCTATGT AACTGCCAAT ATCGAACCCG AGCGCATCGC AGCAGTGCGC AAACAAATTC CGCTTGCTTC GCACAAGGTA CTTCAGAAAT GA
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Protein sequence | MKVSLIQVNS VQDKAFNLAE ADRLAREAID RDGSRLVVFP EHFDWAGGTP EQKIAAGEPH SGGPAYEMCK KLAQDCNVYV HTGSFYESTP DGSRVYNTSV VFDPKGNELG RYRKIHLFDI VTPDGMRYGE SSAVAPGTEV SVVDIEGLKY GFAICYDIRF PELFQKLVAL GADVIVLPAA FTLQTGKDHW DVLCRARAIE TQCYFLAPGQ TGPFEQSGET RYSYGHSLVC DPWGHIIAKA SDGVGYVTAN IEPERIAAVR KQIPLASHKV LQK
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