| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4460 |
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| Symbol | |
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| ID | 1041839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5062617 |
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| End bp | 5063543 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637147853 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_746571 |
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| Protein GI | 26991146 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0031991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAACA GAATCACCCT TCGTCACCTA GAAGCGTTTC GGGCGATCAT GGTGCGTAAA
TCCGTCACCG GTGCTGCAGA AATGCTTGAA GTGACCCAAC CGGTAGTCAC GAGGTTAATT
GCCGATCTTG AGGAACGAAT AGCACTGACA CTGTTTACAA GAACTAAGGG GCGCCTGGTA
CCGACCCCTG AAGCGGCTCT ACTCGTCAAA GACGTCGAGC AGTCGTTGTT GAGCATTGAG
CGCATCGCTA ATGCGGCTAC CAATATCAAA TCTTTGAAAA TGGGGCGACT TGAAATAGCA
GCATCGCCAA ACATGGCGCT CTCTTTCCTG CCACGCGCCA TTAATAGTTT CACTTTGGCC
CACCCCGAAG CACACGTCTC TATGCGTATG CATAGCTCAC CCACCGTTCT CGATATGGTG
CAGCGAGATC AATGTGACCT GGGCTTTGCG ATGTTTCCGG CACGCTCCAC AAAATCGGGA
AACAGCGAGA CTCTGGTATC CGCTAAAATG GTCGCGGTAG TACCAAAAAC GCACGCCCTT
GCCACAAAAA GGACTTTAAG ACCGGAGCAC TTTGAAGGTG AACGCTTCAT TTCCATGATG
CCCCTTATGG AATCTAGAAT GCGTATAGAC TCATTGATGC TTTCTCATGG AGTTAGACGA
CACGTAAACT GCGAAACCCA AACCTCTGCC GCAGTCTTGC AGCTCGTTGA AGCAGGCGTA
GGGATATCGA TCATCGACCC CCTAACAGCC TGTGGATATA CCGGAACAGG CGTAAAGTTT
CTAAACTTTG AGCCAGTAAT TAGAAATGAT TACTCTATCG TGATATCACA GAGAAACTCA
TCAACACTGA TATTAAAACC ATTCATCGAC CATGCAAAAA GAGAAATCCT CAACATGGTT
CCTGCGCATC TGCTAATCCG AAGCTAG
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| Protein sequence | MENRITLRHL EAFRAIMVRK SVTGAAEMLE VTQPVVTRLI ADLEERIALT LFTRTKGRLV
PTPEAALLVK DVEQSLLSIE RIANAATNIK SLKMGRLEIA ASPNMALSFL PRAINSFTLA
HPEAHVSMRM HSSPTVLDMV QRDQCDLGFA MFPARSTKSG NSETLVSAKM VAVVPKTHAL
ATKRTLRPEH FEGERFISMM PLMESRMRID SLMLSHGVRR HVNCETQTSA AVLQLVEAGV
GISIIDPLTA CGYTGTGVKF LNFEPVIRND YSIVISQRNS STLILKPFID HAKREILNMV
PAHLLIRS
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