Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4459 |
Symbol | |
ID | 1042042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5061322 |
End bp | 5062419 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637147852 |
Product | transposase, putative |
Protein accession | NP_746570 |
Protein GI | 26991145 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00353592 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTCTC AAGACATCGT GCTCAGTGAC GATGAACAAG TTGAGCTGAA CCGACGAGTT CGGTCTGCCA CCATTAGCCA GCGCGATGGC CGTCGAGCAC GTGTAATCTT GCTGGCCGCT CAAGGTCATT CACGTAATGA AATCGCTGAG CTGACTGGCC TCTCCGTGGT TTCCGTCACC CGCTGGTGCA AGCGGTTTCA AGCACTGCGT CTTCAGGGCT TGGTAGATTT GCCGGGGCGA GGCCGCAAGC CTTCATTGCC TGCCGAAGCC TTGCAGCGAA CACTTGAGCA GGTCACTCAA CCGCGCATCG GTCAGCCACG CTGGAGCTGC CGTAGCATGG CGCGTGTCGC TGGTATTTCT CCTGCCAGCG TTCAGCGGAT CTGGGCTGCA AACGACATCA AGCCGCACCT CACCCGCACC TTCAAGCTGT CCAACGATCC GCAGTTCGAA GAAAAATTCT GGGACGTTAT CGGCCTGTAC CTGGCGCCAC CGGATAAGGC GTTGGTGCTC TGCTGCGATG AAAAGAGCCA GGTTCAAGCT CTGCAACGCA CGCAACCAGG CTTGCCATTG GGCATCGGCC ACATCCGCAC GCAAACCCAT GACTATGTCC GCCACGGCAC GCTAACGTTG TTCGCTGCCA TGGACTATCT GCAAGGTCGG CTGATCAGCA GCATCGAAAC CCAGCATCGG CATCAGGAGT GGCTGGCCTT CCTGAAAAAG ATCAACCGAG AAACCCCCAA AGGTCTGCAA CTGCATTTGA TCGTGGATAA CTACGCCACT CACAAGCATC CCGTGGTCAA GGAATGGCTT AAGCGGCATC CACGATTCCA CCTGCATTTC ACCCCGACCT CAAGCTCCTG GATGAACATG GTTGAGCGCT TCTTCCGGGA TATCACCGTT TACCTGCGCG ACGGCAGCTT CAGTTCCACA CGTGAACTGG CCAGCTCCAT TACCACGTTT TTAGCGCTGC ACAACGCCCA ACCCTCTCGG TACGTCTGGA GCGCGAAAGG TGAAGACATC TTGCGCAAGA TCCAGGGTGC CCGAGAGGCA ATGGCACGCG AGAATAAAGA GAACGTTTTA TCTGAGACAG GACACTAG
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Protein sequence | MNSQDIVLSD DEQVELNRRV RSATISQRDG RRARVILLAA QGHSRNEIAE LTGLSVVSVT RWCKRFQALR LQGLVDLPGR GRKPSLPAEA LQRTLEQVTQ PRIGQPRWSC RSMARVAGIS PASVQRIWAA NDIKPHLTRT FKLSNDPQFE EKFWDVIGLY LAPPDKALVL CCDEKSQVQA LQRTQPGLPL GIGHIRTQTH DYVRHGTLTL FAAMDYLQGR LISSIETQHR HQEWLAFLKK INRETPKGLQ LHLIVDNYAT HKHPVVKEWL KRHPRFHLHF TPTSSSWMNM VERFFRDITV YLRDGSFSST RELASSITTF LALHNAQPSR YVWSAKGEDI LRKIQGAREA MARENKENVL SETGH
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