Gene PP_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4438 
Symbol 
ID1043872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5033560 
End bp5033895 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content62% 
IMG OID637147832 
ProductISPpu14, transposase Orf2 
Protein accessionNP_746550 
Protein GI26991125 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000480323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGCA TCGATGCCAT CTGGCTGGCC ACCGAGCCGA TGGACATGCG CGCTGGCACC 
GAGACAGCAT TGGCCCGGGT GATTGCGGTG TTTGGTGCGG CGAAGCCGCA CTGCGCTTAT
CTGTTTGCCA ATCGCCGGGC TAACCGAATG AAAGTACTGG TGCACGACGG CGTGGGCGTC
TGGCTTGCCG CGCGGCGCCT GAATCAAGGC AAGTTTCACT GGCCCGGCAT TCGTCATGGC
TGTGAGGTCG AACTCGACAG CGAGCAACTC CAGGCGTTGG TACTGGGTTT GCCGTGGCAG
CGAGTCGGCG CGGGTGGCGT GATCAGCATG CTGTAA
 
Protein sequence
MIRIDAIWLA TEPMDMRAGT ETALARVIAV FGAAKPHCAY LFANRRANRM KVLVHDGVGV 
WLAARRLNQG KFHWPGIRHG CEVELDSEQL QALVLGLPWQ RVGAGGVISM L