| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4434 |
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| Symbol | dadA-1 |
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| ID | 1041878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5031207 |
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| End bp | 5032505 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637147829 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | NP_746547 |
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| Protein GI | 26991122 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.615719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000811455 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGTAC TGATACTTGG TAGCGGCGTC GTCGGAACTG TCAGTGCCTA CTACCTCGCT
CGAGAAGGGT TTGAAGTCGT CGTGGTAGAT CGCCAAGACG GCCCCGCGAT GGAAACAAGC
TTCGCAAACG CAGGGCAGGT TTCTCCGGGG TATGCCTCCC CTTGGTCAGC CCCTGGAGTG
CCATTGAAGG CCATTAGATG GATGCTTCAG CAACACGCAC CTTTAGCGAT CAAGCCAACG
TCTAGCCTGG ATCAGTATCG TTGGATGATC CAGATGTTGC GTAACTGTAA TCCGGCAAGC
TATGCAGTCA ACAAAGAACG GATGGTTCGA ATTTCCGAAT ATAGCCGAGA CTGCCTGGAT
GAACTCAGGG CTGAGACTGG TATATCTTAC GAGGCTCGCC AACTCGGAAC TACGCAACTG
TTCCGCACTC AAGCTCAAGT AGATAATGCT GCTAAGGACA TAGCTATCCT GAAACAGTCA
GGCGTGCCTT TCGAGTTACT TGATCGCGAC GGAATTGCTA AAGCTGAGCC GGCGCTCGCA
AGTGTTCGCG ATAAGCTAGC AGGGGCTCTT CGCTTGCCAA ATGATCAGAC CGGTGACTGT
CAAATGTTCA CGCGGAAGTT GGCAAAGATG GCCGAAGAGC TTGGCGTGGA GTTTCGTTTT
GGATGTAATA TTGACCGCCT CGAATGCTCT GGAGATACTA TTTCCGGCGT ATGGATCGAC
GGAAAACTCG AAGTAGCCGA CCAATATGTG CTGGCGCTGG GAAGTTACAG CCCCCATATG
TTAAAGCCGC TGGGCATCCA AGCACCTATC TACCCGCTGA AGGGATACTC CCTTACGATT
CCCATCACCG ATGCAAGTAT GGCCCCCTCA TCAACCATTC TTGATGAAAC CTACAAGGTC
GCTATCACAC GCTTCGATGA TCGAATCCGT GTTGGTGGCA TGGCTGAAAT AGCGGGCTTC
GATCTGTCAC TGAACGCTCG CCGCCGAGAC ACGCTTGAGC TTGTTGTAGG CGACCTTTAT
CCAAAAGGTG GGGATCTCAC CAAAGCTACG TTTTGGACAG GGCTACGCCC AGCAACGCCT
GACGGTACTC CGATTGTAGG TAAAACAAAA TACCGCAACC TGTTCCTCAA TACCGGCCAC
GGGACTCTAG GCTGGACGAT GTCTTGCGGC TCAGGTCGAT TGCTGGCCGA TTTGATGGCA
GGAAAAAAGC CAAAGATCAG CGCCAAAGGC CTTGATATCT CCCGTTACTC CAACCAAAAG
GAAGCCCATA ATCATGGCAA TCCAGCGACT GCACTCTAA
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| Protein sequence | MRVLILGSGV VGTVSAYYLA REGFEVVVVD RQDGPAMETS FANAGQVSPG YASPWSAPGV
PLKAIRWMLQ QHAPLAIKPT SSLDQYRWMI QMLRNCNPAS YAVNKERMVR ISEYSRDCLD
ELRAETGISY EARQLGTTQL FRTQAQVDNA AKDIAILKQS GVPFELLDRD GIAKAEPALA
SVRDKLAGAL RLPNDQTGDC QMFTRKLAKM AEELGVEFRF GCNIDRLECS GDTISGVWID
GKLEVADQYV LALGSYSPHM LKPLGIQAPI YPLKGYSLTI PITDASMAPS STILDETYKV
AITRFDDRIR VGGMAEIAGF DLSLNARRRD TLELVVGDLY PKGGDLTKAT FWTGLRPATP
DGTPIVGKTK YRNLFLNTGH GTLGWTMSCG SGRLLADLMA GKKPKISAKG LDISRYSNQK
EAHNHGNPAT AL
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