| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4426 |
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| Symbol | |
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| ID | 1043905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5021696 |
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| End bp | 5022352 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637147821 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_746539 |
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| Protein GI | 26991114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000584538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATTTCT TCGACTGGAA CTATGCAATA CAGCTCTTGC CCGAATTGTT CCGGGCAGCT
CTTAACACAA TCGGCGTCAC GTTGCTGGGC TTTGCAATCG CTATCGTTCT TGGACTGTTC
CTCGCCATTG GCAGACGCAG CGCAAGAATA TGGATCTCTT GGCCAATAGG TGGGGTGATC
GAATTTATCC GCAGTACACC TTTACTGATC CAAGTTTATT TTCTTTATTA CGTTCTGCCT
AACTACGGCG TTAGCCTGAC AGCAATGCAA GTAGGCGTGC TAGGCATTGG TCTACACTAC
GCCTGCTATC TGGCAGAGGT ATATCGAAGC GGCCTTGATG CGGTTCCGCG AGGCCAATGG
GAAGCAGTGA CAGCACTCAA CATGAGTCCT TCGCTTGCCT ATCGAAACAT CATTTTACCC
CAAGCTCTCC GTCCGATTTT GCCACCGGTT GGCAACTACC TGGTTGCGAT GCTGAAAGAT
ACACCTGTGC TTTCAGCTAT CACTGTCGTT GAGATCATGC AGCAAGCAAA GAACATCGGC
TCTGAGACGT TCCGATATCT TGAGCCCATC ACCATGGTAG GCGTGTTCTT CCTTGCTCTG
AGTATTGTTC TGGCTTATTT GGTACGCCGC GTTGAAGCGC GCTTGGAGCA AAAATAA
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| Protein sequence | MNFFDWNYAI QLLPELFRAA LNTIGVTLLG FAIAIVLGLF LAIGRRSARI WISWPIGGVI
EFIRSTPLLI QVYFLYYVLP NYGVSLTAMQ VGVLGIGLHY ACYLAEVYRS GLDAVPRGQW
EAVTALNMSP SLAYRNIILP QALRPILPPV GNYLVAMLKD TPVLSAITVV EIMQQAKNIG
SETFRYLEPI TMVGVFFLAL SIVLAYLVRR VEARLEQK
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