| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4423 |
|---|
| Symbol | |
|---|
| ID | 1042420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5019114 |
|---|
| End bp | 5020109 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637147818 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_746536 |
|---|
| Protein GI | 26991111 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | [TIGR02994] ectoine utilization protein EutE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000112678 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA GTCCCATCAA GCCAACTATC GATTTCGACC AACAAGGGGT GTCGCACGGG
TTCTTGAAGC TGCCTTACTC ACGTGATGAC TCTGCGTGGG GTGCGATCAT GATTCCTATC
ACCGTCATGA AAAACGGGAT CGGCCCGACT GTGCTCCTCA CTGGCGGCAA TCATGGAGAC
GAGTATGAAG GCCCGATTGC ACTCACCAAG CTGGCCAATC AACTGGACAT CGAAACAGTC
AGAGGGCGAA TCATTATTTT GCCCTTCATG AACTATCCTG CTTTTAAAAA CGCCTCCAGA
ACCTCTCCGA TTGATCGCGG GAATCTGAAT CGTACCTTCC CAGGTAAGGC TGACGGGACA
GTTACGGAAA AAATTGCTGA TTATATCCAG CGACACTTGT TGCCATTGGC GGATTACGTC
CTTGATATCC ACTCTGGCGG CAAGACTCTG GACTTCATTC CATTTGCCGC TGTTCATATT
CTGCCGGACA AGCTGCAACA GCAGAAAGGC GAACGGGCAA TGGATGCTTT CGCGGCTCCC
TACAGCATGA AAATGCTGGA AATCGATAGC GTGGGCATGT TTGATACGGC TGTCGAAGAA
GCCGGTAAAA TCTTTGTGAC TACCGAGCTT GGTGGTGGGG GTACAGCCAG CTCCACCACT
ATTAAAATTG CAGAGCGCGG GGTACGAAAT TTCCTGGTTC ATGCAGGGGC GGTCATGGGT
GATCTTGATA TTGCACAGGA CAGCATCTTC TTGGATATGC CTGACGACAA TTGCTTCATT
GCAAGCGAGC ATGCCGGGCT CATTGAATAC TGCTTCAATC TGGGCGATCA GGTCTCCAAA
GGCGATGTGA TTGCTCGAGT GTACGACGTC ACAAGAACAG GTGTGGCACC TACCGAATAC
AAGGCCCAAC GTGACGGCCT TCTTGCCTGC CGTCACTTCC CGGGGCTTGT GCAGTGCGGT
GACACAATCG CAGTTCTGGC TGAGAAAATC TCTTAA
|
|---|
| Protein sequence | MKPSPIKPTI DFDQQGVSHG FLKLPYSRDD SAWGAIMIPI TVMKNGIGPT VLLTGGNHGD
EYEGPIALTK LANQLDIETV RGRIIILPFM NYPAFKNASR TSPIDRGNLN RTFPGKADGT
VTEKIADYIQ RHLLPLADYV LDIHSGGKTL DFIPFAAVHI LPDKLQQQKG ERAMDAFAAP
YSMKMLEIDS VGMFDTAVEE AGKIFVTTEL GGGGTASSTT IKIAERGVRN FLVHAGAVMG
DLDIAQDSIF LDMPDDNCFI ASEHAGLIEY CFNLGDQVSK GDVIARVYDV TRTGVAPTEY
KAQRDGLLAC RHFPGLVQCG DTIAVLAEKI S
|
|---|
| |