Gene PP_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4421 
Symbol 
ID1044262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5015969 
End bp5017360 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content57% 
IMG OID637147816 
Producthypothetical protein 
Protein accessionNP_746534 
Protein GI26991109 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000130906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAGC AAAAGCAAGA TTTGATCTCC CAACAAGATC GCGGTGCAGT GCTCCACCCG 
TTCACCCAGC TGAAAGACTT TGCCTCTGGC AAGGCAGGTG ATCCAACAAT CATCGAAACC
GCGAAAGGGA TCACTATCAC TGACGCGACT GGGCGTGAGT ACATCGATGG CTTCGCTGGC
CTGTACTGCA TGAACGTCGG CTATGGCCGT ACCGAAGTCG CCGAGGCGAT CTCCAAGCAA
GCCCACAAGC TGGCGTACTA CCACACCTAT GCTGCGCACA CCACGGAAGA GCTCGCTCGC
CTGTCTGACC GCCTGGTGAA GATGGCTCCG GGCAAAATGA GCAAGGTCTT CTACGGCATG
TCCGGTTCGG ATGCCAACGA GACCCAAGCC AAACTGGTCT GGTACTACAA CAACCTGCGC
GGTAAGCCGA ACAAGAAGAA GATCATTGCT CGTGAGCGCG GCTACCACGG TTGCTCCGTA
GTTTCTGGTT CCATGACCGG CATGTCGTTC TACCATGACC ACATGGATCT GCCGATTGCA
GGCATCCTGC GTACTGGTGC TCCTCACTAC TACTGGGGCG CCGAGCCAGG TGAGACTGAG
CTGGAATTCT CTGCCCGCCG TGCACGTGAA CTCGAAGAGC TCATCCTGCG TGAAGGCCCA
GACACCATCG GCGCATTCAT TGCTGAGCCT GTGCTCGGAA CCGGTGGTAT TACCCCTCCG
CCAGAAGGCT ACTGGGCTGC TGTTCAGCCT GTATTGAAAA AGTACGACAT CCTGCTGATC
GCTGACGAAG TGATCACCGG CTTTGGCCGT ACTGGTGCCA TGTTCGGCTG CGACAAGTAC
GGTATCGAGC CTGATCTGAT CACCGTAGCT AAAGGCCTGA CTTCTGCCTA CGCACCGCTG
TCGGCTTCGA TTGTTGGTGA GAAGGTGTAT AAGGTGATGG AGGAAGGCGC TGATCGCGTT
GGTGCCTTCT CCCACGGCTA CACCTACTCG GGCCACCCTA TCGGTGTCGC GGCAGCAAAC
GCTGTGCTCG ACATCGTCGA GGGTGAGAAC ATTCCAGCGC ACGTCGACAA GGTTGGTCAG
TATTTCCAAA AGTCGATGCA GGAGACCTTC TCCTCGCTGC CAATCGTCGG CGAAGTGCGT
GGTGTGGGCA TGATGGCCGC CATTGAGTTC GTAGCGGATC CGGCCACCAA GAAGCGTTTC
GACCCAGCCC TCAAGGTTGG TGCACGGATC TCGAAAGCAG CCCGTGATCG CAACTTGATC
GCTCGTGCTA TGCCTCACGG TGAAATCCTG GGCTTTGCTC CTCCTCTTGT CACGACCGAA
CAGGAAGTGG ATCGCATCAT CAGCATCGCA CACGAAGCTG TGCTGAGCGT CCTTGATGAG
CTGAAGGTCT GA
 
Protein sequence
MDKQKQDLIS QQDRGAVLHP FTQLKDFASG KAGDPTIIET AKGITITDAT GREYIDGFAG 
LYCMNVGYGR TEVAEAISKQ AHKLAYYHTY AAHTTEELAR LSDRLVKMAP GKMSKVFYGM
SGSDANETQA KLVWYYNNLR GKPNKKKIIA RERGYHGCSV VSGSMTGMSF YHDHMDLPIA
GILRTGAPHY YWGAEPGETE LEFSARRARE LEELILREGP DTIGAFIAEP VLGTGGITPP
PEGYWAAVQP VLKKYDILLI ADEVITGFGR TGAMFGCDKY GIEPDLITVA KGLTSAYAPL
SASIVGEKVY KVMEEGADRV GAFSHGYTYS GHPIGVAAAN AVLDIVEGEN IPAHVDKVGQ
YFQKSMQETF SSLPIVGEVR GVGMMAAIEF VADPATKKRF DPALKVGARI SKAARDRNLI
ARAMPHGEIL GFAPPLVTTE QEVDRIISIA HEAVLSVLDE LKV