Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4411 |
Symbol | |
ID | 1043923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5008515 |
End bp | 5009063 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637147806 |
Product | hypothetical protein |
Protein accession | NP_746524 |
Protein GI | 26991099 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0160268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGACTC CAGCTCTGTT CCGCCCTGAG TGCGATCCTG TGACGGTGGT CGGTAGGCCC GATTACGTCA TCTACAGCTG CCTGCAGTGG CAAGACCAAA ATCTCCGGGT GATGACCCAA GCTGTCAAAC AGACCTTTTG CGTAATGTAC GGCGACTTCC TCGATGATCG CTTCATCACA GCCTTGGGGC GTGCTTATCT CCGGGGAGCA ATGGCTCCGG TGAAGCTGAT CGCTTACCAC GAGCAGAATC TGGATATCTT CCTGGACAGC AAAGTATCTA GCAGCAGCAT CCCGGCCATC GAGGCTATTT GGGAGATCGA TACCCACCTG TATTCGGGTC GGCACTACTC CGTAGCTTTC GCGAGTGAAG ACGAGATCTA CTCAGGGCGT TCTGACTACC CATTCTGGCC TGTGGTCAAA GAGATTATGG AGTCAACCGC TCTGGGCATC AGTCCGTATG AGCTCCCCTG CTATGGCGAA AATGACCTGG AAGACTACAC CGACGACAGC CTGAGCTTTC TCCCTTCTAT CGATGAGGGC CAGCCATGA
|
Protein sequence | MSTPALFRPE CDPVTVVGRP DYVIYSCLQW QDQNLRVMTQ AVKQTFCVMY GDFLDDRFIT ALGRAYLRGA MAPVKLIAYH EQNLDIFLDS KVSSSSIPAI EAIWEIDTHL YSGRHYSVAF ASEDEIYSGR SDYPFWPVVK EIMESTALGI SPYELPCYGE NDLEDYTDDS LSFLPSIDEG QP
|
| |