| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4407 |
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| Symbol | |
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| ID | 1041721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4999146 |
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| End bp | 5000528 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147803 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_746521 |
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| Protein GI | 26991096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0417319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAC ACGGTTTGAA GCAAAGCCTC AAGCAGCGGC ATATCACCAT GATCGCGCTG
GGTGGGGTGA TCGGTGCAGG GCTGTTCATG GGCTCGGGCT CACTGATCGC ATCGGCAGGG
CCCGCGGCCA TACTGTCGTA TTTCATTGGT GGCCTGGTGG TCACCCTGGT CATGTTCATG
CTGGGCGAAA TGGCCTGCCG CAACCCGGAT GCAGGGTCGT TCTCGACCTA CGCCAACACC
TACCTCGGCG ACTGGGCTGG GTTTGCGGTC GGCTGGCTGT ACTGGTTCAA GTCGATGATG
ACCATCACCC TGGAAGCGGT ACTGCTGGGC GCCATCCTGC ATGACTTCCT GCCCTGGCTA
CCGATCTGGG CAGGCGCCTT CCTGATGCTG GTGACACTCA TGGCCAGCAA CGCCTACTCG
GTGCGTTCGT TTGCCGAAGT AGAGTATTGG CTGGCCGCGA TGAAGGTCGC CACCATCCTT
ATCTTCATGC TGCTGGGCGT CTCGATCCTG CTCGGCCTGC ACAGTGATAT TCCCGCCCCA
GGCCTGATCA ACCTCACCGC CCATGACGGC TTCATGCCCA ACGGCCTGTC ACCGGTGATG
GCCGGCGTTA TCGTGGTGAT TTTCTCCCTG GGCGGCAGCG AAATTGCCGC TGTGGCCGCG
GGTGAATCAG AGAACCCCCG ACAGAACGTG ATCCGCGCGA TCAAGAGCGT GATCCTGCGG
GTGATGCTGT TCTATGTAGG TTCCGTGTCG ATCCTGATCC TTTGCCTGCC CTGGACCGAC
AAGGCCAACC TGGCCTCGCC CTATGTTTCA CTGTTCAGCC TGGCCGGGTT CGGTGGTGCG
GCAGTGGCCA TGAAACTGGT GCTGTTCGTC TCGTTCATGT CAGTGATGAA CTCGTTCATG
TTCTCCAACT CACGCATGCT GTTCTCGCTG AGCCAGCGCG GTCACGCACC CAAGCTGTTC
TCACGCACCA GTGCCAAGGG CGTACCGATC AATGCACTGC TGCTGAGCCT GTCGATCTGC
ACGATGATCC TGACCGTGCA CTTTGTCAGT GGCGGCGACC TGTTCATGAC CTTGGCCAAG
AGTACCGGCA GCCTGGTCAT GGTCGTATGG ATCTTCATCA TCATCGCCCA CGTGGCCATG
CGCATCAAAA CCCGCCACGA AGCGGTCGCC CCAAACGCCT TCCGTGCCTG GCTGTTCCCC
TACACCAATA TCATTGCGCT GTTCGCCTTG CTGGCAGTCA TCGGCACCCA GGCGTTCGAC
CCGGCATCGC GTTTCCAATT CTGGTTCACG GTGCTGACGG TACTGCTGGT GGTGGCGGGG
TACTTCCTGA TGCGCCAGCG GCTGGCGTCA AGCGCGGTGT TAGCCCACGA ACGTGATGCA
TGA
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| Protein sequence | MQSHGLKQSL KQRHITMIAL GGVIGAGLFM GSGSLIASAG PAAILSYFIG GLVVTLVMFM
LGEMACRNPD AGSFSTYANT YLGDWAGFAV GWLYWFKSMM TITLEAVLLG AILHDFLPWL
PIWAGAFLML VTLMASNAYS VRSFAEVEYW LAAMKVATIL IFMLLGVSIL LGLHSDIPAP
GLINLTAHDG FMPNGLSPVM AGVIVVIFSL GGSEIAAVAA GESENPRQNV IRAIKSVILR
VMLFYVGSVS ILILCLPWTD KANLASPYVS LFSLAGFGGA AVAMKLVLFV SFMSVMNSFM
FSNSRMLFSL SQRGHAPKLF SRTSAKGVPI NALLLSLSIC TMILTVHFVS GGDLFMTLAK
STGSLVMVVW IFIIIAHVAM RIKTRHEAVA PNAFRAWLFP YTNIIALFAL LAVIGTQAFD
PASRFQFWFT VLTVLLVVAG YFLMRQRLAS SAVLAHERDA
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