| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4404 |
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| Symbol | lpdV |
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| ID | 1041933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4995609 |
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| End bp | 4996988 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147800 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | NP_746518 |
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| Protein GI | 26991093 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.574545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGA TTATCCAGAC TACCCTGTTG ATCATCGGCG GCGGCCCTGG CGGCTATGTA
GCAGCCATCC GCGCCGGGCA ACTGGGCATT CCTACCGTAC TGGTGGAAGG CCAGGCACTG
GGCGGCACCT GCCTGAACAT CGGCTGCATC CCGTCCAAGG CGCTGATCCA CGTGGCCGAG
CAGTTTCACC AGGCCTCGCG CTTTACCGAA CCCTCGCCGC TGGGCATCAG CGTGGCTTCG
CCGCGCCTGG ACATCGGCCA GAGCGTCACC TGGAAGGACG GCATTGTCGA CCGCCTGACC
ACAGGTGTTG CCGCCCTGCT GAAAAAGCAC GGGGTGAAAG TGGTGCATGG TTGGGCCAAG
GTACTGGACG GCAAGCAGGT CGAGGTCGAT GGCCAGCGTA TCCAGTGCGA GCATCTGTTG
CTGGCGACCG GTTCCAGCAG TGTCGAACTG CCTATGCTGC CGCTGGGTGG CCCGGTGATT
TCCTCGACCG AAGCCCTGGC GCCGAAAACC CTGCCGCAAC ACCTGGTGGT GGTCGGCGGT
GGCTATATCG GCCTGGAGCT GGGCATTGCC TATCGCAAGC TGGGTGCACA GGTGAGTGTG
GTGGAAGCGC GGGAGCGCAT CCTGCCGACC TACGACAGCG AATTGACCGC CCCGGTGGCC
GAGTCGCTGA AGAAACTGGG CATAGCGTTG CACCTGGGCC ACAGCGTCGA GGGCTACGAA
AATGGCTGCC TGCTGGCCAG CGACGGCAAG GGTGGGCAAC TGCGCCTTGA GGCCGACCAG
GTACTGGTGG CCGTGGGACG CCGGCCACGC ACCAAGGGCT TCAACCTGGA ATGCCTGGAC
CTGAAGATGA ACGGCGCCGC CATTGCCATC GACGAGCGCT GTCACACCAG CATGCACAAC
GTCTGGGCCA TCGGCGACGT CGCTGGCGAA CCGATGCTGG CGCACCGGGC CATGGCCCAG
GGCGAGATGG TCGCCGAAAT CATCGCCGGC AAGGCCCGAC GCTTTGAACC GACAGCGATT
GCCGCCGTGT GCTTTACCGA CCCGGAAGTG GTGGTGGTCG GCAAGACCCC GGAACAAGCC
AGCCAGCAGG GCCTGGACTG CATCGTCGCG CAGTTCCCGT TTGCCGCCAA TGGCCGGGCC
ATGAGCCTGG AATCGAAAAG CGGTTTCGTG CGGGTGGTGG CGCGCCGTGA CAACCACCTG
ATCGTGGGTT GGCAGGCGGT TGGCGTGGCG GTCTCCGAGC TATCCACCGC GTTTGCCCAA
TCGCTGGAGA TGGGCGCGTG CCTGGAAGAT GTGGCCGGTA CCATTCATGC CCACCCAACG
CTCGGTGAAG CGGTACAGGA AGCCGCACTG CGCGCCCTGG GCCACGCCTT GCATATCTGA
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| Protein sequence | MQQIIQTTLL IIGGGPGGYV AAIRAGQLGI PTVLVEGQAL GGTCLNIGCI PSKALIHVAE
QFHQASRFTE PSPLGISVAS PRLDIGQSVT WKDGIVDRLT TGVAALLKKH GVKVVHGWAK
VLDGKQVEVD GQRIQCEHLL LATGSSSVEL PMLPLGGPVI SSTEALAPKT LPQHLVVVGG
GYIGLELGIA YRKLGAQVSV VEARERILPT YDSELTAPVA ESLKKLGIAL HLGHSVEGYE
NGCLLASDGK GGQLRLEADQ VLVAVGRRPR TKGFNLECLD LKMNGAAIAI DERCHTSMHN
VWAIGDVAGE PMLAHRAMAQ GEMVAEIIAG KARRFEPTAI AAVCFTDPEV VVVGKTPEQA
SQQGLDCIVA QFPFAANGRA MSLESKSGFV RVVARRDNHL IVGWQAVGVA VSELSTAFAQ
SLEMGACLED VAGTIHAHPT LGEAVQEAAL RALGHALHI
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