| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4403 |
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| Symbol | bkdB |
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| ID | 1043796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4994335 |
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| End bp | 4995606 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147799 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | NP_746517 |
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| Protein GI | 26991092 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.566746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACGC ACGTCATCAA GATGCCGGAC ATTGGCGAAG GCATCGCGCA GGTCGAGTTG
GTGGAATGGT TCGTCAAGGT CGGCGACATC ATCGCCGAGG ACCAGGTGGT GGCCGACGTC
ATGACCGACA AGGCCACCGT GGAAATCCCC TCGCCGGTCA GCGGCAAGGT GTTGGCCCTG
GGTGGCCAGC CCGGGGAAGT GATGGCGGTC GGTAGCGAAC TGATCCGCAT CGAAGTGGAA
GGCAGCGGCA ACCATGTGGA TGTGCCTCAG CCAAAACCGG TAGAGGCCCC GGCTGCCCCC
ATTGCAGCCA AGCCGGAACC GCAGAAAGAC GTAAAACCCG CCGTGTACCA GGCGCCCGCC
AACCACGAAG CTGCGCCCAT CGTGCCGCGC CAGCCGGGCG ACAAGCCGCT GGCCTCGCCT
GCCGTGCGCA AACGCGCCCT GGACGCCGGT ATCGAACTGC GTTATGTGCA TGGTAGCGGC
CCGGCCGGGC GTATTCTGCA CGAAGACCTC GATGCCTTCA TGAGCAAGCC GCAAAGCAAT
GCCGGGCAAG CACCTGATGG TTATGCCAAG CGCACCGACA GCGAGCAGGT GCCAGTGATC
GGCCTGCGCC GCAAGATTGC CCAGCGCATG CAGGACGCCA AACGCCGGGT CGCGCACTTC
AGTTATGTCG AGGAAATCGA CGTCACCGCC CTGGAGGCCC TGCGCCAGCA ACTCAACAGC
AAGCACGGCG ACAGCCGGGG CAAGCTGACC TTGCTGCCAT TCCTGGTACG CGCCCTGGTC
GTGGCGCTGC GTGACTTCCC GCAGATCAAC GCGACCTACG ATGACGAAGC GCAGATCATC
ACCCGCCATG GCGCGGTGCA TGTGGGCATT GCCACCCAAG GTGACAACGG CCTGATGGTG
CCCGTGCTGC GCCACGCCGA AGCGGGCAGC CTGTGGGCCA ATGCCGGCGA GATTTCGCGC
CTGGCCAACG CTGCACGTAA CAACAAGGCC AGCCGTGAAG AGCTGTCCGG CTCGACCATC
ACCCTGACCA GCCTTGGCGC CCTGGGTGGC ATTGTCAGCA CGCCGGTGGT CAACACCCCG
GAAGTGGCAA TCGTCGGGGT CAACCGCATG GTCGAACGGC CAGTGGTGAT CGACGGCCAG
ATCGTCGTGC GCAAGATGAT GAACCTGTCC AGCTCGTTCG ACCACCGCGT GGTCGATGGC
ATGGATGCCG CCCTGTTCAT CCAGGCCGTA CGTGGCCTGC TCGAACAACC CGCCTGCCTG
TTCGTGGAGT GA
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| Protein sequence | MGTHVIKMPD IGEGIAQVEL VEWFVKVGDI IAEDQVVADV MTDKATVEIP SPVSGKVLAL
GGQPGEVMAV GSELIRIEVE GSGNHVDVPQ PKPVEAPAAP IAAKPEPQKD VKPAVYQAPA
NHEAAPIVPR QPGDKPLASP AVRKRALDAG IELRYVHGSG PAGRILHEDL DAFMSKPQSN
AGQAPDGYAK RTDSEQVPVI GLRRKIAQRM QDAKRRVAHF SYVEEIDVTA LEALRQQLNS
KHGDSRGKLT LLPFLVRALV VALRDFPQIN ATYDDEAQII TRHGAVHVGI ATQGDNGLMV
PVLRHAEAGS LWANAGEISR LANAARNNKA SREELSGSTI TLTSLGALGG IVSTPVVNTP
EVAIVGVNRM VERPVVIDGQ IVVRKMMNLS SSFDHRVVDG MDAALFIQAV RGLLEQPACL
FVE
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