| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4389 |
|---|
| Symbol | flgD |
|---|
| ID | 1041827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4981978 |
|---|
| End bp | 4982679 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637147785 |
|---|
| Product | flagellar basal body rod modification protein |
|---|
| Protein accession | NP_746503 |
|---|
| Protein GI | 26991078 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.459754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCAATTCCAC TACAGACGTC GGCAGCGCAT ACCTGACCTC GCTGCAGAAG
CAGACGTCCA AGACTGACAG CTCTACCGGC GCCGCCGGCA GCGCGCTGGG CAAGGACGCG
TTCCTGCAGT TGCTGGTCAC CCAGATGCAG AACCAGAACC CGCTCGACCC GCAGGAAAAC
GGCGAGTTCG TGGCCCAGTT GGCGCAGTTC AGCAGCCTGG AAAGCATGCA GTCGCTGAAC
GACGCTGTGA CCTACATCGC GGCCGGGCTG CAATCTTCCC AGGCCTTGCA GGCCTCCTCG
CTGGTCGGGC GCAATGTCAT TGTCCAGACC GACAAGGCTG TGGTCGATAC CAGCAAGGAC
ATGAAGGGCT CGGTCAACCT GACGTCGTCC AGTACCTCCA CCTCGGTGGG GATCTACGAC
AAGGACGACA AGCTGGTGCG CACCATCGAA CTCGGTACCC AGAAGTCTGG CAGCATCGAC
TTTACCTGGG ATGGCCTGAA CGATGACGGT GAAGTCGCGG CCGCCGGGAC CTACACCTTC
AAGGCCACCG CCTCGATCGA TGGCAAGGCC ACGGCCATGA CCACCAACCT GCCGGCCTCG
GTTACCAGTG TGACCATGGG TAGCAACGGT TCGGAGATGA CGCTCAACCT GGCCGGGCTG
GGCAGTGTTG CGCTTTCCAA AATCCAAAGC ATCGGCATCT AG
|
|---|
| Protein sequence | MTTTNSTTDV GSAYLTSLQK QTSKTDSSTG AAGSALGKDA FLQLLVTQMQ NQNPLDPQEN
GEFVAQLAQF SSLESMQSLN DAVTYIAAGL QSSQALQASS LVGRNVIVQT DKAVVDTSKD
MKGSVNLTSS STSTSVGIYD KDDKLVRTIE LGTQKSGSID FTWDGLNDDG EVAAAGTYTF
KATASIDGKA TAMTTNLPAS VTSVTMGSNG SEMTLNLAGL GSVALSKIQS IGI
|
|---|
| |