Gene PP_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4379 
Symbol 
ID1046532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4970635 
End bp4971564 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID637147775 
Productbeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionNP_746493 
Protein GI26991068 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA TCAAAAGCAT TGCGAGTTAC GTGCCCACCG CTGGCCTGGA CAACTACGTT 
CAGGGTGCGA AGTTCGGCAA GGACGAAGAG TTCATGTTCG GCAAGATCGG TGCGTCGTTC
CTGCCGCGCA AGGCCGAAGA GCAAGAAACC TCCGACTTGT GCGTAGAGGC CGCCCAGGCA
CTGTTCGCCA GCAACCCCGA CCTTGATCCG CAATCGATCG ATGCGTTGAT CGTGGTCACC
CAGAACGGCG ACGAAGAAGG TCTGCCGCAC ACCGCAGCCA TCGTCCAGAG CAAACTTGGC
CTGTCTACCC GCGTGGCGGC GTTCGACGTG TCGCTTGGCT GCTCCGGCTA TGTGTATGGC
CTGTATGCGA TCAAAGGCTT CATGGAGGCG GCAGGCCTGA AGAACGGCCT GCTGATCACC
GCCGACCCGT ATTCGAAGAT CGTCGACCCG GAAGACCGCA ACACCACCAT GCTGTTCGGC
GACGCCGCCA CGGCAACCTG GATGGGTGAA AACGCGGTTT GGAACCTGGG CCAGGCGCGT
TTCGGCACTG ACGGTTCCGG TGCCGAGCAC CTGAAAGTCA GTGACGGCAA GTTCTTCATG
AACGGCCGCC AGGTATTCAA CTTCGCCCTG ATCAAGGTGC CAGCGCACCT GCACGAGCTG
CTGGATGCCA GCGGCCTGAA GTCGTCGGAT ATCGACGCCT TCTGCATCCA CCAGGGCAGT
GCGGCGATTG TCGACGCCGT GGCGCGACGC TTTGAAGAGC AACACCCGGA GAAGTTCGTC
AAGGACATGC TGGAAACCGG CAATACGGTG TCCTCCAGTG TTCCGCTGCT GCTGCAGAAG
CACATGCTCG ATGGCAGCTG GAAGCGCGTG GCGATCAGTG GCTTTGGCGT GGGCCTGTCG
TGGGGCTCGG CCATCCTGTA CCGCGACTGA
 
Protein sequence
MIGIKSIASY VPTAGLDNYV QGAKFGKDEE FMFGKIGASF LPRKAEEQET SDLCVEAAQA 
LFASNPDLDP QSIDALIVVT QNGDEEGLPH TAAIVQSKLG LSTRVAAFDV SLGCSGYVYG
LYAIKGFMEA AGLKNGLLIT ADPYSKIVDP EDRNTTMLFG DAATATWMGE NAVWNLGQAR
FGTDGSGAEH LKVSDGKFFM NGRQVFNFAL IKVPAHLHEL LDASGLKSSD IDAFCIHQGS
AAIVDAVARR FEEQHPEKFV KDMLETGNTV SSSVPLLLQK HMLDGSWKRV AISGFGVGLS
WGSAILYRD