| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4353 |
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| Symbol | fliR |
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| ID | 1043790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4946582 |
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| End bp | 4947358 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147749 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | NP_746467 |
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| Protein GI | 26991042 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.923206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.179069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAGC TGACCGACAC GCAGATCGGC ACCTGGGTCG CCACCTTCAT CCTGCCGTTG
TTCAGGGTGA CCGCGGTGCT GATGACCATG CCGATTTTCG GTACCCGCAT GTTGCCAGCG
CGGATTCGCC TGTACGTAGC GGTGGCGGTG ACCGTTGTGA TCGTGCCGGC ATTGCCGCCG
CTGCCCGAGT TCGACCCGTT GAGCCTGCGC GGTATGCTGC TGTGCGCCGA GCAGATCATC
GTCGGTGCGC TGTTTGGCCT GGCCTTGCAG TTGCTGTTTC AGGCTTTCGT GGTTGCCGGG
CAAATCGTCG CGGTACAGAT GGGTATGGCG TTCGCCTCGA TGGTCGACCC CGCCAACGGG
GTCAACGTCA CGGTAATCAG CCAGTTCATG ACCATGCTGG TGAGTGTGTT GTTCCTGTTG
ATGAACGGCC ACCTGGTGGT GTTCGAGGTA CTGACCGAAA GTTTTACCAC CTTGCCGGTG
GGGAGTGCGC TGGTGGTCAA CCACTTCTGG GAGCTGGCCG GGCGCATGGG CTGGGTGTTC
GGTGCCGGCC TGCTGTTGAT TCTGCCGGTG ATCGCTGCGC TGCTGGTGGT GAACATTGCC
TTTGGCGTAA TGACCCGCGC CGCGCCGCAG CTGAACATTT TCTCCATCGG CTTCCCGCTG
ACCTTGGTCA TGGGCATGTT CATCTTCTGG GTCGGCCTGG CCGATGTCTT GTCCCACTAT
CAGGCATTGG CCAGCGAAAC GCTGCAATGG CTGCGTGAGC TGGCGAGGGT ACGCTGA
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| Protein sequence | MLELTDTQIG TWVATFILPL FRVTAVLMTM PIFGTRMLPA RIRLYVAVAV TVVIVPALPP
LPEFDPLSLR GMLLCAEQII VGALFGLALQ LLFQAFVVAG QIVAVQMGMA FASMVDPANG
VNVTVISQFM TMLVSVLFLL MNGHLVVFEV LTESFTTLPV GSALVVNHFW ELAGRMGWVF
GAGLLLILPV IAALLVVNIA FGVMTRAAPQ LNIFSIGFPL TLVMGMFIFW VGLADVLSHY
QALASETLQW LRELARVR
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