Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4336 |
Symbol | motC |
ID | 1045521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4926028 |
End bp | 4926768 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147733 |
Product | flagellar motor protein |
Protein accession | NP_746451 |
Protein GI | 26991026 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0869231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCC TCAGCCTGAT CGGTCTGATC CTGGCTTTCG TTGCCATTGT CGGTGGCAAC TTCCTTGAAG GCGGTCATGT CGGTGCTCTG GTCAATGGCC CGGCGGCTCT GATCGTGCTG GGTGGCACCC TGGCGGCGGC GTTGTTGCAG TCGCCGCTAA CGTCGTTCAA GCGCGCCTTG CAGATTTTGC GCTGGATCCT GTTTCCTCCG CGGGTCGACC TGGCGGGCGG CATCGACCGC GTGGTGAACT GGAGCCTGAC CGCTCGCAAA GAAGGCCTGC TGGGCCTGGA AGGGGTAGCG GACAGCGAGC CCGACCCCTA TGCGCGCAAG GGCCTGCAAC TGCTGGTGGA TGGCGCCGAG CCGGAAGCCA TCCGCAGCAT CCTTGAGGTC GACCTCCTTA CCCAGGAGGG CCGTGACATC CAGGCAGCCA AGGTATTCGA AAGCATGGGC GGCTATGCGC CGACCATCGG CATCATCGGT GCGGTCATGG GCCTTATCCA TGTGATGGGC AATCTGGCCG ACCCGTCGCA ACTGGGCAAT GGCATTGCCG TGGCCTTTGT CGCCACCATT TACGGTGTGG CCAGTGCCAA CCTTGTGCTA TTGCCGGTCG CCAGCAAGCT CAAGGCCATC GTCATGCGCC AGTCGCGCTA CCGCGAAATG CTGCTCGAAG GCCTGCTGTC GATTGCCGAA GGTGAAAACC CGCGCTCGAT CGAGCTGAAG CTGCAAGGCT TCATGGAGTA A
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Protein sequence | MDVLSLIGLI LAFVAIVGGN FLEGGHVGAL VNGPAALIVL GGTLAAALLQ SPLTSFKRAL QILRWILFPP RVDLAGGIDR VVNWSLTARK EGLLGLEGVA DSEPDPYARK GLQLLVDGAE PEAIRSILEV DLLTQEGRDI QAAKVFESMG GYAPTIGIIG AVMGLIHVMG NLADPSQLGN GIAVAFVATI YGVASANLVL LPVASKLKAI VMRQSRYREM LLEGLLSIAE GENPRSIELK LQGFME
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