Gene PP_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4335 
SymbolmotB 
ID1043042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4925167 
End bp4926024 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID637147732 
Productflagellar motor protein MotD 
Protein accessionNP_746450 
Protein GI26991025 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.492055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.417746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC GTCGTCATAC CGAGGAACAC GAAAACCACG AGCGCTGGCT GGTGTCGTAC 
GCCGACTTCA TCACGTTGCT GTTCGCCTTC TTCGTGGTGA TGTATTCCAT TTCCTCGATC
AACGAGGGTA AGTACAAGGT TATTTCCCAG GCTTTGCTAG GGGTATTCAA CGACCCCGAG
CGCAGCATGA AGCCGATCCC GATTGGCGAT GAGCAGCCGC TCAGCGTGCG CCCGGCCGAA
CCGCTGGTCA AAGACAGCGA GCAGACCGAA GCGGGCCTGG CGGCGACCAA TGTCGACCCG
TTGAAAACCA TCAGCGATGA CGTGCGCGAT GCCTTCGGCG ACCTGATCAA CAGCGACCAG
ATGACCGTGC GCGGCAACGA GCTGTGGATC GAGATCGAGC TCAACTCTTC GCTGCTGTTT
GGCAGTGGTG ACGCGATGCC CAGTGACAAG GCGTTTGCGA TCATCGAGAA GGTGGCCAGC
ATCCTCAAGC CGTTCGCCAA CCCGGTGCAC GTCGAAGGCT TCACTGACAA CCTGCCAATC
CGCACCGCGC AGTACCCTAC CAACTGGGAG TTGTCCTCGG CGCGCGCGGC CAGCATCGTG
CGGCTGCTGG CCATGGAGGG CGTCAACCCG GCACGCATGG CTTCGGTGGG CTATGGCGAG
TACCAGCCGG TGGCCAGCAA CGATACCGCC GAAGGGCGCG CACGCAACCG CCGGGTGGTG
CTGGTGATTT CCCGTAACCT GGAAGTGCGC CGCAGCCTGA CCGGCTCGGG CAGCGCCAAT
GCCACACCGG ATGCCGCATT GCGCCGGGCT GGCACACAAA GTGCACCGGC AATACAAGCA
ACGGTAGCGA GGCCGTGA
 
Protein sequence
MRRRRHTEEH ENHERWLVSY ADFITLLFAF FVVMYSISSI NEGKYKVISQ ALLGVFNDPE 
RSMKPIPIGD EQPLSVRPAE PLVKDSEQTE AGLAATNVDP LKTISDDVRD AFGDLINSDQ
MTVRGNELWI EIELNSSLLF GSGDAMPSDK AFAIIEKVAS ILKPFANPVH VEGFTDNLPI
RTAQYPTNWE LSSARAASIV RLLAMEGVNP ARMASVGYGE YQPVASNDTA EGRARNRRVV
LVISRNLEVR RSLTGSGSAN ATPDAALRRA GTQSAPAIQA TVARP