| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4326 |
|---|
| Symbol | ccmB |
|---|
| ID | 1041668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4916133 |
|---|
| End bp | 4916801 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637147723 |
|---|
| Product | heme exporter protein CcmB |
|---|
| Protein accession | NP_746441 |
|---|
| Protein GI | 26991016 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT TCATTTTGCT GCTGCGCCGC GAAGCGCGCC TGCTGTTCCG TCGCCCGGCC
GAACTGGCCA ACCCGTTGGT GTTCTTCGCC ATTGTCGTGG CCATGTTCCC GCTGGCGGTC
GGCCCGGAAA GCCAATTGTT GCAAACCTTG TCGCCGGGCC TGGTCTGGGT GGCAGCGTTG
CTGGCCGTGT TGTTGTCGCT GGACGGCCTG TTCCGCAGCG ATTTCGAGGA CGGCTCGCTG
GAGCAATGGG TGCTGTCGCC GCACCCACTG CCGCTGCTGG TGCTGGCCAA GGTGCTGGCG
CACTGGATCT TTTCCGGGCT GGCGCTGGTA TTGTTGGCGC CACTGCTGGC ACTGATGCTG
GGGCTGCCAA GCCATTGCCT GCCGGTGCTG CTCGGTTCGC TGCTGCTGGG TACGCCGGTA
TTGAGCTTGC TGGGCGCGGT AGGTGCGGCA CTGACAGTCG GCCTTAAACG CGGAGGTTTG
TTACTGGCGT TGCTGATTCT GCCGTTGTAT ATCCCTGTAT TGATCCTGGG CAGTGGTGCG
TTGCAAGCGG CGTTGCAAAA TATGCCGGCA ACCGGCCATC TGCTCTGGCT CGCCAGCCTG
ACGGCCCTGG CCGTTACCCT GGCACCCTTT GCGATAGCGG CCGGCCTGAA GATCAGCGTC
GGCGAATAA
|
|---|
| Protein sequence | MSVFILLLRR EARLLFRRPA ELANPLVFFA IVVAMFPLAV GPESQLLQTL SPGLVWVAAL
LAVLLSLDGL FRSDFEDGSL EQWVLSPHPL PLLVLAKVLA HWIFSGLALV LLAPLLALML
GLPSHCLPVL LGSLLLGTPV LSLLGAVGAA LTVGLKRGGL LLALLILPLY IPVLILGSGA
LQAALQNMPA TGHLLWLASL TALAVTLAPF AIAAGLKISV GE
|
|---|
| |